KEGG   Capsicum annuum (peppers): 107858504
Entry
107858504         CDS       T04646                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107858504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107858504
Spliceosome [BR:cann03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107858504
 Complex B
    107858504
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 107858504
NCBI-ProteinID: XP_047262288
LinkDB
Position
2:70700410..70708235
AA seq 551 aa
MAEYESNGEDINNYTDYYKHSSREYEKDRDSSRSREKDRVKGRDRDRDRDRDRDRDGNRD
RYRGRERDKDKDKDREREKERDSHHRDRSDRRERERTRDRDDDDRHRTRDYDQHKDHDKD
RESRHRLRSRSKGRSEHRSRSRSRSRSKSKRISGFDMAPPTTAILPGDTAAAGQVPGTNP
TIPGMLPNMFPLASGQYGALPLMPVQAMTQQATRHARRVYVGGLPATANEQSVAIFFSHV
MSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSD
YNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESF
GPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQP
KPEQESVLLYAQQQIALQRLMLQPGALATKVLCLTQVVEVDELSNDDDYQDILEDMRTEC
GKFGLLVNVVIPRPNPNGEHAPGVGKVFLEYGDVDTASKARQSLNGRKFGGNQVVAVFYS
ENKFYVGDYDG
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggcggagtatgaaagcaacggagaagacataaacaattacaccgattattacaagcat
agttctcgtgagtacgaaaaagatagggactcatcaagaagcagggaaaaggacagggtg
aaagggcgtgaccgtgaccgtgaccgtgaccgggaccgggacagggatggaaacagagac
cggtaccggggtagggaaagagacaaagacaaggacaaggacagggagagagagaaagag
cgtgatagtcatcacagggatcgtagtgacagaagggagagggagaggaccagagataga
gatgatgatgaccgtcatcgaactcgagattatgaccagcataaagatcatgacaaagat
agagagagtcggcatagacttaggtctcgctcaaagggtagatctgagcatagatcaagg
tctcgatcgcgttctcgatccaagagcaaaaggatcagtggttttgatatggcacctcct
accactgcaatattacctggtgatacagctgctgcaggtcaagttcctgggaccaaccca
acaattcctggaatgcttcctaacatgtttcctttagcatcgggccagtatggagctctt
cctcttatgccagtccaggcaatgacacagcaggccactaggcatgctcgacgagtatat
gttggtggacttcctgctactgcaaacgaacagtctgttgcaatcttctttagtcatgtt
atgtctgcaattggaggaaatacagctggtccaggtgatgctgttgtcaatgtctatata
aactatgagaagaagtttgcttttgttgaaatgagatctgttgaggaagctagtaatgcg
atggcattggatggcatcatatttgagggtgcaccttgtaaggtcagaagacccagtgat
tacaacccgtctctggctgctactcttggtcctagccaaccaaacccaaatctcaacctg
gcagctgttggattgtccccaggttctgcaggagggcttgaaggccctgatcgtattttt
gttggtggtttgccctactatttcacagaagcacagattagagagctgttagagtctttt
ggtccacttagaggatttgatttggtcaaagatagagaaactgggaactcaaaaggctat
gccttctgtgtctatcaggatgtttccgttactgatattgcttgtgcagctctcaatggg
attaagatgggtgataaaacccttactgttaggcgtgctaaccaaggtacaacacaacct
aaacctgagcaagagagtgtactgttgtatgcacagcaacagatagctttgcagagactt
atgttacaacctggtgcattagctacaaaggtcttgtgcttaacacaagttgttgaggta
gatgagctcagtaatgatgatgactaccaagatattttggaagacatgagaactgaatgt
gggaagtttggtttactggtgaatgttgttattccacgtccaaatcctaatggtgagcat
gcaccaggggttggaaaggtatttttggagtatggagatgtcgacactgccagcaaagct
cggcaaagtttgaatggaagaaaatttggtggcaaccaagttgtagctgtcttctattca
gaaaacaagttctacgtgggggactatgatggttag

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