Capsicum annuum (peppers): 107858603
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Entry
107858603 CDS
T04646
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03420
Nucleotide excision repair
cann04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107858603
09124 Replication and repair
03420 Nucleotide excision repair
107858603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cann03051
]
107858603
03400 DNA repair and recombination proteins [BR:
cann03400
]
107858603
Proteasome [BR:
cann03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107858603
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107858603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
UBA_RAD5A
TECR_N
CUE
UBA_3
Ubiquitin_4
Crinkler
Motif
Other DBs
NCBI-GeneID:
107858603
NCBI-ProteinID:
XP_016558819
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Position
2:complement(78086205..78096066)
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AA seq
381 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETAQGPDVYPAPQQMLIHQGKVLKDTTTLE
ENKVAESSFVVVMLSKNKVSTSGASAAQPAPSNSAQPATSTGQPTQTVAAPQATAASMPP
AQSAPESAPTPAPAAANPVTDVYGQAASNLVAGSTLETTVQQILDMGGGSWERDTVVRAL
RAAYNNPERAIEYLYSGIPEQAEIPPAAAAPASGQAVNPPVQSSQPAVPSGGPNANPLDL
FPQGLPNVGSNVGAGNLDFLSNSPQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQE
HQADFLRLINEPVEGEGNVPGQPAGAIPQAVTVTPEEREAIERLEAMGFDRALVLQVFFA
CNKNEELAANYLLDHMHEFDE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtgaagactttgaaaggcacgcacttcgagatcgaagtgaaacccgaa
gacacggttgctgatgtgaagaaaagcatagaaacagctcaaggtccagatgtctacccc
gctccacaacagatgcttatccaccagggtaaagttctcaaggacactacaacattggag
gaaaacaaagttgctgaaagtagttttgttgttgtaatgctttccaagaataaggtctca
acaagtggagcctcagctgcacagccagcaccttcaaattcggcccaacctgcaacatcc
acaggccaacctacacagacagtagcagcacctcaagcaacggctgctagtatgccacct
gcacaatctgctcctgagtctgctcctactcctgcgccagctgctgctaatcctgtgacg
gatgtgtatggccaagcggcatcaaatcttgttgctggaagtaccttagaaactacggtt
cagcagattcttgatatgggtggtggaagttgggaacgggatacggttgtgcgtgctcta
cgtgctgcatataacaatccggagagagctattgaatacttatactccggtattcctgag
caagcagaaatcccgcctgctgctgctgctcctgccagtggacaggcagtaaatcctcca
gttcagtcttcacagccagcagttccgtccggtgggccaaatgctaatcctctggatctc
tttcctcagggccttccaaatgtgggttcaaatgttggagccggaaatttggatttctta
agtaatagtccgcagtttcaagcccttcgagcaatggtgcaagcaaacccacagatattg
cagcctatgctccaggagttgggtaagcaaaatcctcaattgatgcggctgattcaagaa
catcaagctgactttttgcgcctcatcaatgaacccgttgagggggaagggaatgtgcct
gggcagccggcaggagctataccacaagctgtgactgtcacacctgaagagcgtgaggct
attgaacgacttgaagctatgggtttcgatcgagctttggtattgcaagtattttttgca
tgcaacaaaaatgaggagctggctgcaaactatctgttggatcacatgcatgagtttgat
gaatga
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