Capsicum annuum (peppers): 107858838
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Entry
107858838 CDS
T04646
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107858838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107858838
03036 Chromosome and associated proteins [BR:
cann03036
]
107858838
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107858838
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107858838
PBAF complex
107858838
GBAF(ncBAF) complex
107858838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
FIST
Motif
Other DBs
NCBI-GeneID:
107858838
NCBI-ProteinID:
XP_016559129
LinkDB
All DBs
Position
2:102756223..102760816
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AA seq
536 aa
AA seq
DB search
MSGNNNNNPNKNIGGPSSFGNSPPTNPMAHLQSQSSGQQQMPAGFPGTFQLSQLAHAQAI
AQAQSKVQAQAQAAAHAQFQAQLQAQGLSLTQAHALGNFGSNSPSIPGSGSAKRLPQKPP
VRPPAFTTTNMVSPMRTMELSAAARRKKQKLPEKHMHEKVAAILPESALYTQLLEFESRV
DSALARKKVDIQESLKNPPTIQKTLRIYVFNTFANQVRTIPKKPNAEPPSWTLKIVGRIL
EEGMDPEQAAMFQKSNTMYPKFSTFFKRVTISLDQKLYPDNHIIIWDSARSPAPQEGFEV
KRKGEQEFTVNLRLELNYMPEKYKLSPALTEVLGIEVETRARIMSSLWHYVKARKLQNVE
DPSYFNCDPPLQKVFGEGKVKFNTVTQKITPHLSPPQPIHLEHRIKLSGNNPAATACYDV
VVDVPFPIQRELNALLANTEKTKEIEACDEAIVSAIRKIHEHRRRRAFFLGFSQSPVEFI
NALLESQMKDLKVVGGEASRNAEKERRSQFYSQPWVEDAVIRYLNRKPPSDAPGSG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaacaacaataataaccctaataagaacataggaggaccatcctccttcggc
aattcaccgccgacgaatccgatggcacatctgcaatcacaatcgtcagggcagcaacag
atgccggccggatttccgggtacatttcagttatcccagttagcacatgctcaagcaatt
gcacaagcgcaatcgaaagttcaggctcaagcacaagctgctgcacatgcccaatttcag
gctcagttacaagctcagggtttgtctcttacccaggctcatgctcttggcaattttggt
tctaattcgccttcgatccctggaagtggttccgcgaaaaggttgcctcagaaacctcct
gtacgtccacctgcatttacgactactaatatggtttctccgatgaggaccatggagctt
tctgcggcggctcggaggaaaaagcagaaacttccggagaagcatatgcacgagaaagtg
gcggcaattttgcctgaatctgcgctttatactcagcttcttgagtttgaatctcgggtt
gattctgctttagctagaaagaaagtggacatccaggagtccttgaagaatccacctact
attcaaaagactcttcgaatttatgtgttcaatacttttgctaatcaggttaggactatt
cctaagaagccaaatgctgaacctccttcgtggacccttaagattgtaggaaggattttg
gaggagggaatggatcctgaacaagctgccatgtttcagaagtctaacaccatgtaccca
aagttctcgactttcttcaaaagagtcacaatttcgttggaccagaaactgtatcctgac
aaccatattataatatgggactctgcacgatctcctgcacctcaagagggtttcgaggtc
aagagaaagggagagcaagagttcactgttaatttaaggctagaattgaattacatgcct
gagaaatacaaactttcaccagctttaactgaagttctgggtattgaggttgagactcgt
gcaagaattatgtcttctctctggcattatgttaaggcacgaaagttgcagaacgttgag
gatccttcttacttcaactgtgatccgccgcttcagaaagtttttggggaaggaaaggtt
aagttcaatacagtaacgcaaaagatcacacctcatttgtctcctccacaacccatacat
ttggaacacaggattaaactttctggaaataaccctgctgcaactgcttgttacgatgta
gtggttgacgtgccattccctatccagagggagctgaatgccctgctggccaacacagaa
aagaccaaggagattgaagcttgtgatgaagcaattgtttctgcaataaggaagatccat
gagcatagaaggagaagggcattttttctcggttttagtcaatctcctgttgagtttatt
aatgcacttctagaatcccagatgaaggatctgaaagttgttggtggggaggcaagtcgc
aatgctgagaaagagcgtcggtctcagttttatagtcaaccatgggttgaggatgctgtt
attcgctacctgaatcgcaagccaccttctgatgcccctggaagtggatga
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