Capsicum annuum (peppers): 107859401
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Entry
107859401 CDS
T04646
Name
(RefSeq) endonuclease MutS2 isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107859401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107859401
DNA repair and recombination proteins [BR:
cann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107859401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
OmpH
HsbA
Halogen_Hydrol
IQUB
Agenet
MRP-S27
ArlS_N
Motif
Other DBs
NCBI-GeneID:
107859401
NCBI-ProteinID:
XP_047262907
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All DBs
Position
2:complement(129549321..129561735)
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AA seq
906 aa
AA seq
DB search
MNLFTCSCKINNIFTLHLPILHINRRTTRFSIRFSSESTHRLKLAESLQSETLELLEWPA
LCQQLSSFTSTSMGFDAAESARIPVGRTPDESRKLLSQTSAAVAVPRPLDFTGIQDVSSI
VDASVAGGILSIGELCAVKRTLAAARFLLQQLEEIASQGDFSERYSPLKEILHSCDYLVE
LEQKIEFCIDCSFSVILDRASEDLEIIRSERKRNMDNLESLLKKISTRVFQGGGFDRPLV
TERRSRMCVAISASHRSLLPNAVILGKSSSGSTYFMEPKEAVELNNMEVKLSSSERVEEQ
TILSLLTSEIAESNMKIKRLLDKIVEIDLAFARAAHAQWTGGVCPALSSRDCNISQPECL
SINVEGIQHPLLLESSLRNLSTNAPPRLPGLDQGNGVMNFETKPHAHFPVPIDIKIGHGT
KVVVISGPNTGGKTASMKTLGLASMMLKAGMYLPAQNQPRLPWFDLILADIGDQQSLEQS
LSTFSGHISRLCEILEVASRESLVLIDEIGSGTDPSEGVALSESILQYLKDRVNLAVVTT
HYADLTRLKEKDSRFETAATEFSLETLQPTYRILWGSMGESNALNIAKSMGFDERIIEQA
VLWVNKLTPDKQQEQKGLLYRSLLEERDGLESQAMEAASLHSDIMNIYNEINNETQDLDE
REGALKSRQTHEIQQEVNTVKNEIQTIVQRFESQLRNASADDINTLVKKAEAAIASIIEA
HQPSKDSLVREIGQSLYTPQVGEQVYVKAFGNKLATVVEEPGDDDNILVQYGKIRVRVDR
RSIRPIPPDASSSAAHLKTQVQQIRNLRDLRSLSEASKNQQDSFGAVVQTSKNTIDLRGL
RAEDASLQLNMAIDSRAPNSVLFVIHGMGTGVLKESALKLLRDHPRVVKFEQESPMNYGC
TVAYIK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcacctgcagctgcaaaatcaacaatatcttcacccttcatcttcctatc
cttcacatcaaccgccgtacaactcgtttctccatccgcttctcatccgagtcaactcac
agactcaaactcgccgagtcactacaatccgaaaccctggagcttctagaatggcccgca
ctctgtcagcagctctcttccttcacttccacttccatgggattcgatgcagcagaatct
gctcggattccggtggggagaactcccgatgagagtaggaaactcctctctcagacctcc
gccgccgtggcagttcctcggccgttggattttaccggaattcaggatgtttcatccatc
gttgatgcttccgttgctggaggaatactctctattggtgaactttgcgctgtgaaacgg
acattggctgcggcgagatttttacttcaacagttggaggagattgcctcgcagggtgac
ttttctgaaaggtactctcctctgaaggaaattcttcacagttgtgattatcttgtggaa
ttggagcaaaaaatagaattctgtattgattgcagcttttcagtaatccttgacagagct
agtgaagatttggaaattataaggtctgagagaaagaggaacatggataatctagaatca
ttgttgaagaaaatatcaactcgagtttttcaaggtggaggatttgacaggcctttagtg
accgagcgccgttcaagaatgtgtgttgctatcagtgcttcgcatagatctttgcttccc
aatgctgtaatcctaggtaagagcagtagtggatctacatacttcatggaacctaaagag
gcagttgagttaaacaacatggaagttaaactttcaagttctgaaagggttgaggagcaa
acaattttgagtttgcttacatctgaaatagcggaatctaatatgaaaataaaacgcttg
ttagataaaatagtggaaattgatcttgcatttgcaagagctgctcatgctcagtggacg
ggtggtgtctgtccagctttaagttcaagagattgtaacatatcccaacctgaatgttta
tctataaatgtggaagggatacaacatcctttgcttcttgagtcctccttgagaaacttg
tccactaatgcgcccccaagattacctggtttggatcaaggaaatggtgttatgaatttt
gaaacaaaacctcatgcacatttccctgtgcccattgatattaaaataggtcatggaaca
aaggttgttgtcatctcaggccctaacaccggaggtaaaacggcttcaatgaagacccta
ggactggcttctatgatgttgaaggctggcatgtatttgcctgcccaaaatcaaccacgg
cttccatggtttgatctcattctggcagacattggagaccaacagtctctggaacaaagt
ttgtcaacctttagtgggcacatttcacggctttgtgagattctagaagtcgcttctaga
gaatctctagttcttatcgatgaaattggaagtggcactgatccttcagaaggtgtagca
ctttcagaaagcatactgcaatatctcaaggacagggtcaatttagctgttgtaactacc
cactatgcagatttaactcgcttaaaagaaaaggacagtcggtttgaaacagcagcaaca
gagttttccttggagactctacagcctacctatcggattctctggggaagcatgggagaa
tcaaatgccttaaatattgcaaaatcaatgggctttgatgaaagaataattgagcaagca
gtattatgggtgaacaaattaacaccagacaagcaacaggagcagaagggcttactttat
cggtcactacttgaagaaagagacggactagaatctcaagcaatggaagctgcttctctt
cattcagacattatgaatatttataatgagatcaataatgaaacacaagatcttgatgaa
cgtgaaggagccctcaaatcaaggcaaacacatgaaatccaacaggaagtgaatactgtg
aaaaatgagatccaaactatagtacagcggtttgagagccaactcagaaatgcaagtgct
gacgatattaatacacttgtaaaaaaagcggaagctgctattgcatcgataattgaagct
catcagcctagtaaagattctcttgtcagagaaataggccagagcctttacacaccacag
gttggtgaacaagtatatgtgaaggcgtttggaaataagttagccactgtggttgaggaa
cctggagatgatgacaatatccttgttcaatatggaaaaatcagagtccgagtggacaga
cgcagtataagacccatcccccctgatgcttcttccagtgcagctcacttgaaaacccag
gttcagcagatcaggaatcttagggaccttcgaagtctttctgaagcaagcaaaaatcag
caggattcttttggcgctgtggtgcagacatctaaaaacacaatagacttgcgtggcctg
cgggcagaggatgcttccctccagctaaacatggccattgattcaagagctcctaattct
gttctttttgtaattcatgggatgggcactggggtccttaaggaatctgcacttaaatta
ctaagagaccatcctcgtgttgttaagtttgaacaggaaagtcctatgaattatggctgt
acagttgcttatatcaaatga
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