Capsicum annuum (peppers): 107859429
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Entry
107859429 CDS
T04646
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cann04812
]
107859429
Cytoskeleton proteins [BR:
cann04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107859429
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
107859429
NCBI-ProteinID:
XP_016559932
LinkDB
All DBs
Position
2:130278469..130291566
Genome browser
AA seq
1029 aa
AA seq
DB search
MAKRGYKLQEFVAHSGNVNCLRFGKKTRRQFLTGGDDQNVKLWSIGKPTSTASLSGHTSP
IESVAFDSAEVLVLAGASSGVIKLWDLEETKMVRTLTGHRSYCTACEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFSPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVNFWDLETFELIGSTRREAAGVRSITFHPDGRT
LFCGLDDSLKVYSWEPVMCHDSVEMGWSTLSDLCVHDGKLVGGAYYQNYVGVWVADISLI
EPYGAGLTPETQNNLKQKQEHVESRLERVGSNRSSNSNRRCTSPDIDSKEIKNIYVDSEN
PVTIKKVTPPPSKVVPPSDSKENKKQLSQKLNSVIGLPAKTNGLPVGKSFVVPSVVPRDI
PEEKNLDTCRRESISATSVSGGIPQKPSHIKHSSSNNFDMEKISVVLQSEFADNLPCTVD
FKKESDIDSRLMAYNNSREHSEAKDPAVKHGGEKLEKTSLQPPLNSQENRNVASEGRKEL
HPVRFVNGVAVVRGRTRSLVERFEKREGLNMDDLHKLDAVSHSKTEETEVSPLPPSSCKD
GEPETVTKKIDEERETSPLTASHFITEEATRPLPSARTKVEEENTYALPASQCEVEELDA
SHRPASKFKSEELRTTHLPASHSDAEKLEASPMPASQFKSEEVGEFHLPASCSKGEESEA
SRMPASQVKSEDVRKSRFPTSRTKAGELEASPVPASQLKPDYARRSRLPASRSKAEEVEA
SPVPVSRFKTGARTSRLSTLRSKAEEAKTSRLLASRSKAEEAQTFRLLSSGSNAEPPQTA
PLPNTEQQTIARCEPVQTDDIILEDLMQSHDVLLSAFRSRLTKLQVVRHFWERNDIRGAI
NALRKLPDHSVQADVVSVLIDKLEIVTLDLFSCLLPVLLALLDSKVERHANVSLDLLLKL
IAVFGPVIRSAVSARPSVGVDLHAEERVQCCRQCSAYLQDIQKTLPVLTRRGGQLAKCAL
QLNLLLQES
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtggctacaaattgcaggaatttgtggcacattcggggaatgtaaactgt
ttaagatttgggaagaagacgcgtagacagtttctcactggtggagatgatcaaaatgtg
aaactttggtccattggtaaaccaacatccaccgcgagcctaagtggtcacacgagtcca
atagaatctgtagcttttgactcagcagaggttctagtgcttgctggagcttcatcaggt
gtaataaagctatgggatctggaagaaacaaaaatggttcgcactcttactggacacaga
tcatattgcactgcctgtgaattccatccttttggtgaattttttgcatctggatctatg
gacactaatcttaagatatgggatataagaaagaaaggatgcatccacacatacaaaggt
catactcgaggaataagtacaataagattctctcctgatggccgctgggtggtttctggc
ggatttgacaatgttgtgaaggtatgggacctaacagctggaaagctcttgcatgacttt
aagttccatgaagggcacattcgatccatagatttccatccacttgagtttcttttggcc
acaggttctgctgaccgtactgtaaacttttgggatttggaaacatttgaattgattgga
tctactagacgtgaggctgcaggagtgcggtcaatcacctttcatccagatggaaggact
ttgttttgtggactggatgatagcttgaaggtttattcatgggagcctgtgatgtgtcac
gactccgttgaaatgggatggtcgactttaagcgatctctgcgtacatgatgggaagctt
gtaggtggtgcctattaccaaaactatgttggagtttgggttgcagatatttcgcttatt
gagccctatggagctggtttaactccagagacacaaaataacttgaagcagaaacaggaa
cacgtggagagtcgtttagaaagagttggaagcaacagaagttctaattcaaatcgtcgc
tgcacatcacctgacattgattccaaggaaattaagaatatatatgtggacagtgaaaat
cctgtaactattaagaaagttactcctcctccatcaaaagtggttcctccctcagattct
aaggaaaacaagaaacagttgagtcagaagcttaattctgtcattggtttacctgcaaaa
actaatggattgccagtaggtaaatcatttgtcgtccccagtgtggtacctcgtgatatc
ccagaggagaagaacttggatacttgtagaagggaatctatttctgcaaccagtgtaagt
ggtggtataccacaaaagccgtctcacataaagcactcatccagcaacaactttgatatg
gagaagatttcggtggttcttcagtctgaatttgcagacaacttgccgtgtacagtagat
tttaagaaggaatcagatattgatagcaggcttatggcatataataattccagggaacat
tctgaggcaaaagatccagctgtcaagcatggtggagaaaagcttgagaaaacttcattg
caaccaccgctgaatagtcaagagaaccgtaacgtggcttccgaaggcaggaaagagttg
catccagttagatttgtgaatggagtggctgttgtgcgaggaaggacgcgcagtttggtt
gagaggtttgagaaaagagaagggttaaacatggatgatctccataagctggatgcggtg
tctcattctaaaactgaagaaacggaagtatcccctttgccaccttcctcttgtaaagat
ggggaaccagaaaccgttaccaaaaaaattgatgaggaacgcgaaacatcccctttgaca
gcttcacattttataacagaggaagcaacacgccctttgccttcagctcgcacgaaagtt
gaggaagaaaatacatatgctttgcctgcttctcaatgtgaagttgaggaattagatgca
tcccacaggccagcttctaagtttaaatcagaggaactaagaacaacccatttaccagct
tctcattctgatgctgagaaattagaagcatcccctatgccagcttctcagtttaaatct
gaggaagttggagaattccatttaccagcttcttgttctaaaggtgaggaatctgaagca
tcccgtatgccagcttcacaggttaaatccgaggatgtaagaaaatcccgttttccaact
tctcgtactaaagctggggaattagaagcatcccctgtgccagcttcacagcttaaaccc
gactatgcaagaagatcccgtttaccagcttctcgttctaaagctgaggaagtggaagca
tccccagtgcctgtttctaggtttaaaaccggagcaagaacatcccgtctgtcgacttta
cgttcaaaagctgaggaagctaaaacatcacgcttattagcttctcgttctaaagctgag
gaagcacaaacattccgcttgttgtcttctggttctaatgccgagccaccacaaacagcc
cctttgccgaatacggagcagcagactattgcacggtgtgagccagttcagactgatgat
attattcttgaagatcttatgcaaagccatgacgtgctgctaagtgcgttcagatctcgt
ttgacaaagctgcaggtagttcgtcacttctgggaacggaatgacatcaggggtgctata
aatgccttgaggaagttgccagatcattctgtacaagctgatgttgtgagtgtcctcatc
gataaactggagattgtcactttggatttgttttcgtgcttgctgcctgtactattggcc
ttacttgatagtaaggtagaaaggcatgcaaacgtttccctggatctgttgttgaaactt
atagcagtatttggaccagtaattcgctcagctgtttcagcacgtccatctgtaggggtt
gatcttcatgcggaagaaagagttcagtgctgccggcagtgctctgcttacctccaagat
atacagaaaacacttcctgtacttacaaggagagggggtcagttggcaaaatgtgcatta
caattaaatcttctacttcaagaatcatag
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