Capsicum annuum (peppers): 107859670
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Entry
107859670 CDS
T04646
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107859670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107859670
03400 DNA repair and recombination proteins [BR:
cann03400
]
107859670
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107859670
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107859670
BRCA1-C complex
107859670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107859670
NCBI-ProteinID:
XP_016560236
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All DBs
Position
2:complement(135562564..135572199)
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AA seq
563 aa
AA seq
DB search
MVWGLFPIDPLPGEDNYYFFNKGTYKVGRKGCDVIVNKDKGVSRIHAEILIDEMVSLGHS
LKKPSNILSKVRIKDCSKYGTFLNRNLDSMEKVHEFPNKETMLKDGDLVSFGTGNATYRF
SYESFIFFICSPKNSKTNQLITKKVSSIGASITKKWSLDCSHVLVDDSFPLNKDLIDAIV
ARKPLIQYSWVELIAEKNICTDIPSCSSHAPNLMLEGVSVKVVDPQSRECCLKGYTFLLE
PENKYKFEGRLQSLLEVGGADISSAEMVSEKNGNDRVVCVVPAGSCSSKCFSNHSSLPWV
SEIDLVSAVLSGYLDPSRITSPPVLVTSSCSTDETVVADSDAETESAKSDNIAAAFCSIE
SSDHDSKGRTSTHKLESVEYSNDDKCSVQIVIPRDKVSMRDTSPSSTKPAKHDGGHIQHD
DATIHEPEGGYIRRLDVKSDNTVAKEDSTDGQESGKSDIVYSQDLIVKDSIMSLPVSSTN
GGAKNFKCFRKANAPSQNSFAIFIPFSKHPYQESDFKDENVAESIKEEKKRKQMEAIAED
LFNSEKGRKRGVAGALHGLFARR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggggctttttcctattgacccacttccaggtgaagataattactatttcttc
aataaaggtacatataaagtgggtcgaaaaggatgtgatgtcattgtcaacaaggataaa
ggagtttctaggattcatgcagagattttaatagatgagatggtttcgttgggtcattca
ttgaagaaaccgtcaaatattttgtctaaagtacgtataaaagactgctcaaagtatggt
acattcctcaacaggaatctggattcgatggagaaagttcatgagtttccaaataaagaa
acaatgcttaaggatggagatctagtttcatttggaactggtaatgcaacttacagattc
tcttacgagtccttcatatttttcatttgctccccaaagaattcaaagacaaatcaactt
attacaaagaaggtgtcatcaataggggccagtataactaagaagtggagtttggattgc
tcacatgtgcttgtagatgattcctttccactgaataaggatctgattgatgctattgtc
gctagaaaacccttgattcaatatagttgggttgagctaattgcagaaaaaaatatttgc
accgatattccaagctgcagttctcatgcaccaaacttgatgctggaaggagtgtccgtg
aaagtggtggatcctcagtcgcgggagtgttgtttgaaaggatatacttttttgctggaa
ccagaaaacaagtataaatttgagggaaggttgcagtccttactggaagttgggggtgcc
gatatttcttctgctgaaatggtctcagagaaaaatggaaatgaccgtgtggtatgtgta
gttccagcaggatcatgcagctctaagtgtttttctaaccatagttccttgccttgggtg
agtgagatagatctggtttctgcggttctatctggatatctggatccttctcgtatcaca
tcgccaccggttctcgttacgtcttcttgctccacagatgagacagtggttgcagactca
gatgcagaaacagaaagtgcaaagtcagataacattgctgctgctttctgttcaatagaa
tcttcagaccatgacagcaagggaagaacttctacacacaaattagaatctgttgaatat
tctaacgatgataagtgttctgttcaaatagttatacctagggataaggtatccatgagg
gacacgtctcccagttcaacaaagcctgctaaacatgatggaggtcacatacaacatgat
gatgctaccatccatgaacctgaaggtggttacatcaggcgcctagatgtcaaaagtgat
aatacagtggcaaaagaagatagcactgatgggcaggaaagtgggaagtcggacatcgta
tatagccaagatttgattgttaaagattccatcatgtcattaccagtctcttcaacaaat
ggtggagctaaaaattttaagtgcttccgtaaggcaaatgctccatcccagaatagcttt
gcaatcttcataccgttctccaagcatccatatcaagaatctgattttaaggatgagaac
gttgctgaatctattaaagaagagaaaaaaagaaaacagatggaagctattgccgaggac
ctgtttaacagtgaaaagggaagaaaacgtggtgtagctggtgccctgcatgggttgttt
gctcgtagataa
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