KEGG   Capsicum annuum (peppers): 107859716
Entry
107859716         CDS       T04646                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107859716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107859716
Spliceosome [BR:cann03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107859716
 Complex B
    107859716
 Complex C
   U2 SnRNP specific factors
    107859716
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 107859716
NCBI-ProteinID: XP_016560289
LinkDB
Position
2:136171388..136177774
AA seq 807 aa
MLGTSPILPLPAPPLDGNLGPTPPAQVLEEPKDDKMEENEEENNKADNVSTSVATHTRTI
GIIYPPPDIRSIVDKTSQFVAKNGPEFEKRIVQSNAGNAKFNFLNASDPYHAYYQHRLAE
ARSQNQASGELPTHPEDKEAAPAPPIADAAEATAKPDLSAQFRPVIKVLEPPEAEQYTVR
LPEGITGEELDIIKLTSQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLMDKLQKSAADMTTVLERCLRRLEWERSQEQARQKAEDEIEQERLQMAMI
DWHDFVVVETIDFSDDEDQDLPPPMTLEEVIRRSKMPMLEEEDYVEPGKEVEMEMDEEEV
QLVEEGMRAANLEENGGIKSAETMAIPEEKDPPMRIVKNWKRPEERIPAERDTTKYVVSP
ITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKGTTLAQDDEISRNIVGLARTRPDI
FGTTEEEVSNAVKAEIEKRMEESKQVIWDGHTGSIGRTASHVMSQNNTDDQNDTANDARN
LPGPQAPPPLRPGLPSVRPLPPPPGLVLNIPRPPNTVQYSTPTSAGVAAPSPPRPAMVNM
IPQARPPPPPMPQMPGQQNLMVNHPPMPPSMAMNSHSLPIPPPPGSQFASLGAPRPFVPH
PMSQPGMSMVPPPPMPQGMPPPPPPEEAPPLPEEPEPKRQKLDESILIPEDQFLDQHSGP
ARINVSVPNTDEGNLKGQVLGITVQSLSETIASLKEKISGEIQLPANKQKLSGKAGFLKD
NLSLAYYNIAFGETLSLSLRERGGRKR
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgttaggcacctcaccgatattgcctcttccggcgcccccgttggatgggaatctggga
ccaacacctccagctcaggtgttagaggaaccaaaggatgataagatggaagagaatgaa
gaggaaaacaataaagctgacaatgtttcaacatctgttgcaacacatacaagaactatt
ggtataatttacccccctccggatattaggagtattgttgacaagacttcacagtttgtg
gcgaagaatggtccagaatttgagaagaggattgttcaaagtaatgctggcaatgcaaaa
ttcaactttctgaatgcttctgatccttaccatgcctattatcagcaccgtctggctgaa
gctcgctcacagaatcaggcttctggagagctgcctactcatccagaagacaaagaagca
gcccctgctcctcctattgctgatgctgctgaggcaactgcaaaacctgatctgtcagct
caatttagacctgtcataaaggttcttgagccacctgaggcagagcagtataccgttaga
ctccctgaagggatcacaggtgaagaactggatatcattaagcttacatcacaatttgtg
gccagaaatgggaagtctttcttaactgggttgacaagcagagagataaataatccccaa
tttcattttctaaagcctactcacagtatgttcatgtttttcacttcacttgcggatgca
tattcaaaagttctgatgcctcctaaaggtttgatggataagctgcagaagagtgctgct
gacatgacaacagtcctagagcgatgtcttcgtcggttggaatgggaaagatcacaggag
caggctagacagaaagctgaagatgagattgaacaggagaggttgcaaatggctatgatt
gattggcatgattttgttgttgttgagacgatagatttttctgatgatgaggatcaggat
ttacctccacctatgactcttgaggaggttataaggaggagcaagatgcctatgttggag
gaagaggactatgttgagcctggaaaggaggtggaaatggagatggatgaagaagaggtg
cagctagttgaagaaggtatgcgagctgcgaatcttgaagagaatgggggtatcaagagt
gctgaaaccatggcaattccagaagaaaaggatccaccaatgcggattgtgaagaactgg
aagaggcctgaagagaggatcccggcagaaagggacacaactaagtatgttgtctctcct
attactggtgaactaatacctattaatgagatgtctgaacatatgagaatctctctcatt
gatccgaagtacaaggaacagaaggacaggatgtttgcgaagattaagggaacaactctt
gcacaggatgatgagatttctaggaacattgttgggcttgcccgaacccgtccagatata
tttggtacaacggaagaagaagtttcaaatgcggtcaaggctgagattgaaaaaaggatg
gaagagtcgaagcaggtcatatgggatggtcacacaggtagcattggccgcactgcaagc
catgtaatgtctcagaacaacacggatgatcagaatgacactgcaaatgatgcaagaaac
cttcctggtccgcaggctcctccacctctcagacccggtcttccatctgttaggccacta
cctccacctcctgggcttgtgctgaatattcctaggcctcctaatacagtgcagtactcc
actcccaccagtgctggggttgctgctccgtctccacctcgacctgctatggttaacatg
attcctcaggctcggcccccacctcctcccatgccacaaatgccaggtcagcaaaacctc
atggtgaatcatcccccaatgcctccatcaatggctatgaattcgcatagccttccgatt
ccaccacctcctggatcacagtttgcatctttgggagcacctcgaccctttgttcctcat
cccatgtcccagcccggaatgtctatggttccgcctcctcctatgccccaaggaatgcca
ccacctcctccacccgaggaagcccctcctctcccggaagagccagagccaaagaggcaa
aagcttgatgagtctattctcattcccgaagaccagtttttggatcagcactcgggacct
gcaaggatcaatgtatctgtgcctaatactgatgaagggaatctcaaaggacaagttctg
ggaatcacagtgcaatctctgtctgaaaccattgccagtctgaaagagaagatttccggg
gagatccagcttcctgcaaataaacaaaagctgagtggaaaggctggttttctcaaggac
aacttgtctcttgcatactataatattgcttttggagaaacactcagtctctctctgaga
gaacgtggtgggagaaagagatga

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