KEGG   Capsicum annuum (peppers): 107859828
Entry
107859828         CDS       T04646                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45a
  KO
K12897  transformer-2 protein
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107859828
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cann01009]
    107859828
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107859828
Protein phosphatases and associated proteins [BR:cann01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107859828
Spliceosome [BR:cann03041]
 Common components
  Common spliceosomal components
   SR proteins
    107859828
SSDB
Motif
Pfam: RRM_1 CoV_nucleocap RRM_5 RRM_DEAH11 SDP_N
Other DBs
NCBI-GeneID: 107859828
NCBI-ProteinID: XP_016560437
LinkDB
Position
2
AA seq 230 aa
MADSPRERYSRSPSPWEEKSRSRSRSRSRSPSRSQSRPRGRSRSRSHGRDEDSNPGNTLY
VTGLSTRVTERDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQ
SVLEGRYITVEKSRRKRPRTPTPGHYLGLQNPRGGDGYRGDRGRYRGRDDYGYRRSPRRS
PYRGGRDYSPRRSPYAEGRDVRDPGHILLMKGTTLAVTDRDFSRHVWFPL
NT seq 693 nt   +upstreamnt  +downstreamnt
atggctgattctcctcgtgaaaggtattctcgctctccgtcaccttgggaagaaaagtca
agatctcgctctcgatcaaggtctagatccccatctagatcacagtcaaggccaagagga
agatcaaggtccagaagtcatggaagggatgaagattctaatcccggaaacacactctat
gtgactggattatctacaagggtcactgaaagggatcttgaggagcatttctcaaaggag
ggaaaggtgaagtctgcttttctagttgtggagccccgttctcgcatctctcgtggtttt
gcttttataacaatggatagtcttgaggatgctaatcgctgcattaagcaccttaatcag
tccgtccttgaagggcggtacataacagtggagaagtctcgtagaaaacgcccaaggact
ccaacacctggtcattatctcggactgcagaatccaaggggtggtgatggttatcgtggt
gatcgtggcaggtatcgtggccgtgatgactatgggtaccgaagatctccaaggcgctct
ccatatagaggtggacgagattattctcctagacgatcaccttatgctgaaggtcgagac
gtgcgcgatcccggtcatattctccttatgaaaggcactaccctcgcggttacagatagg
gatttttcaaggcatgtgtggtttccgctctag

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