Capsicum annuum (peppers): 107859892
Help
Entry
107859892 CDS
T04646
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b isoform X1
KO
K11088
small nuclear ribonucleoprotein D3
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107859892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107859892
03041 Spliceosome [BR:
cann03041
]
107859892
03032 DNA replication proteins [BR:
cann03032
]
107859892
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107859892
Spliceosome [BR:
cann03041
]
Complex A
U1 snRNP components
Sm proteins
107859892
U2 snRNP components
107859892
Complex B
U1 snRNP components
107859892
U4/U6.U5 tri-snRNP components
107859892
Complex C
U2 snRNP components
107859892
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107859892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
107859892
NCBI-ProteinID:
XP_016560528
UniProt:
A0A1U8FVR8
LinkDB
All DBs
Position
2:complement(139002609..139005249)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEATGHIVTVEMKSGELYRGSMVECEDNWNCQLESITYTARDGRVSQL
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSLGVGRGRAIAMRAKAQAAGRGA
APGRGAVPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagcttaggcataccagtgaagcttctacatgaagcgacagggcatatagtg
acggttgagatgaagagtggagagttgtacagaggaagtatggtggaatgcgaggataac
tggaattgccaactcgaaagcatcacttacactgctagagatgggagagtgtctcaatta
gagcatgttttcattcgaggcagcaaagtcaggttcatgataattcctgatatgcttaag
aatgctcccatgttcaagcggctagaagcaagaatcaagggaaaaggtacatcgcttgga
gttggtcggggacgtgctattgctatgcgagctaaagctcaggctgctggtcgtggagca
gcacctggtcgaggtgccgtgccgcctgtaagaagatga
DBGET
integrated database retrieval system