KEGG   Capsicum annuum (peppers): 107860140
Entry
107860140         CDS       T04646                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107860140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107860140
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     107860140
    NSL complex
     107860140
   HMT complexes
    COMPASS/SET1 complex
     107860140
    COMPASS/SET1 complex (yeast)
     107860140
    MLL-HCF complex
     107860140
    MLL3/MLL4 complex
     107860140
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107860140
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C eIF2A Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N WD40_like WD_LRWD1 Beta-prop_HPS5 Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_NOL10_N Big_7 VPS8_N DUF5888 PALB2_WD40 WDR54 PQQ_2 HPS6
Other DBs
NCBI-GeneID: 107860140
NCBI-ProteinID: XP_016560885
LinkDB
Position
2:143256235..143261690
AA seq 314 aa
MTSTPEPSDSFKPYELKHTLSGHKRAVSAVKFSDDGKLLATSSADKTARTWDVSDGSLLH
EFLGHEQGISDVAFSSDGRHLATASDDKTIRLWDVATGAHVKTLTGHTNYVFCVNYNPQA
NMLVSGSFDETVRMWDVKTGKCLKVLPAHSDPVTAVNYNRDGTLIVSSSYDGLCRIWDAS
TGHCVKTLIDDENPPVSFVKFSPNGKFLLVGSLDNSLRLWNFSTGKVLKTYTGHANSKFC
VSSTFSITNGKYIVSGSEDKCVYLWELQSRKIVQKLEGHTDTVISVACNPTQNMIASGSL
GNDKTVKIWTQGED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgacttcaactcctgagccttcagattctttcaaaccctacgagctcaaacacactctc
tccggccacaaacgcgccgtctccgccgtcaaattctctgacgacggcaaactcctcgcc
acttcctccgccgacaaaaccgccagaacatgggacgtctccgacggctcccttcttcac
gaattcctaggtcacgaacaaggcatctccgatgttgccttttcctccgacggacgtcat
ttagctactgcttccgatgacaaaactatccgattatgggatgttgctactggggcccat
gtcaaaaccctaacaggtcatacgaattacgtattttgtgttaattataatcctcaagct
aatatgttggtttctgggtcgtttgatgagacggttagaatgtgggatgtgaaaactgga
aagtgtcttaaggtgcttccggcgcattcggatcctgttactgctgtgaattataatcgg
gatgggacgttgattgtttcgagtagttatgatggtttgtgtagaatttgggatgcttca
actggacattgtgtgaagacccttattgatgatgaaaatccacctgttagtttcgtcaag
ttctcgcccaatggcaaatttttactcgttggctctttggataattctctgaggctttgg
aacttctcgacaggaaaagttctgaaaacttacacaggccatgccaactcaaagttctgt
gtttcatcaacattttctataacaaatgggaaatatattgtcagtggttctgaggataag
tgtgtgtatttgtgggaacttcaatcgaggaagatagttcaaaaattggaaggtcatact
gatactgtgatttctgtagcatgcaaccccactcagaacatgattgcttctggttctctt
gggaatgacaagactgtgaagatatggactcagggggaagactaa

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