Capsicum annuum (peppers): 107860296
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Entry
107860296 CDS
T04646
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107860296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107860296
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107860296
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
107860296
NCBI-ProteinID:
XP_016561089
LinkDB
All DBs
Position
2:146065376..146072869
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AA seq
372 aa
AA seq
DB search
MSERKLVVLGIPWDVDTEGLREYMIKFGDLEDCIVMKERATGRSRGFGYVTFATLEDAKN
ALSKEHFLGSRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVSEATFRSYFEKYGEITD
LYMPKDPSTKGHRGIGFITFDRAESVDDLMSDTHELGGSTIVVDRATPKEEEFRPVSRMS
QGGGGGYGAYNAYINATTRYAALGTPTLYDHPSSMYGRGGGGGFPSRGGMGQKIFVGRLP
QEATTEDLRQYFGRFGRVLDVYVPKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQ
VAIDSATPLDDAGPSSNYMMDPPPPPPPEPYGGYGGPMRSYGRMYGGLDYDDWGYGLGGG
RPSRSDMRYRPY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaggaaactcgtggttttaggcattccatgggacgtggatacagaaggtcta
agggagtatatgatcaaattcggggacttagaggactgtattgtcatgaaggagcgtgct
actggtcgttctcgtggattcggctatgtcacatttgctacacttgaggatgctaagaat
gcattgtctaaggagcactttcttggaagcagaatgctagaagtgaaagtggcgacacca
aaggaggagatgagggctcctgcaaagaaagtgaccaggatttttgttgctaggattcct
ccgtctgtatctgaagctactttcagaagttattttgagaagtacggtgaaataacagat
ctatatatgccaaaggatccatctaccaagggacatcgtggaattgggtttataactttt
gaccgtgctgaatcagttgatgatctgatgagtgacacccatgaactgggaggttccaca
attgttgtcgaccgagcaacacccaaggaagaagaattcagacctgttagtcggatgtcg
cagggtggtggaggaggatatggtgcatataatgcatatattaatgcaacaactagatat
gctgcgcttggtactcccaccttatatgaccatcctagttctatgtatggaagaggcggt
ggaggaggatttccatctcgtggtggcatgggccagaagatctttgttggccggctacct
caagaggcaacaactgaagatcttcgccagtattttggtagatttggccgtgttttagat
gtttacgttccaaaggatcccagaagaccagggcacagagggtttggttttgtcaccttt
gctgacgatggtgttgcggatcgtgtttctcgaagacctcatgaaatatgtggacatcag
gttgcaattgattctgccactccccttgatgatgctggtccaagtagtaattacatgatg
gatcctcctccccctcctcctcctgaaccttatgggggatatggtggtcctatgcgttcc
tatggcaggatgtatgggggcctagattatgatgattggggttacggcttgggtggaggg
agaccttcaagatcagatatgagatacaggccctactag
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