Capsicum annuum (peppers): 107860583
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Entry
107860583 CDS
T04646
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107860583
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107860583
REST complex
107860583
Heterochromatin formation proteins
Other heterochromatin formation proteins
107860583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
107860583
NCBI-ProteinID:
XP_016561464
UniProt:
A0A1U8G0F5
LinkDB
All DBs
Position
2:151320500..151331296
Genome browser
AA seq
1348 aa
AA seq
DB search
MKRLRDDMYDTPPTFKRPFSSSRGESYSQSQVPGNGLGGGGGGSSAGGAGGSNPKLTTSD
ALTYLKEVKEMFQGQRDKYDMFLDVMKDFKAQRIDTTGVIARVKDLFKGHPKLILGFNTF
LPKGYEITLSDEDEAPKKTVQFEEAISFVNKIKTRFQNDDHVYKSFLDILNMYRKEHKGI
NEVYHEVAVLFNDHPDLLDEFTRFLPDTSGTASVAQTSFGRPSFHRYDERSSPVPILRQS
HMDKRIRRDRIIGAHAERDLSIERPDLDDEKTMMKFHKEQKRRAEKESRDRRTHDQDYKE
PDNENNEDLSMKRHIDKRKSARKVEEFGGPHEDKDALKNMHSKEFEFCDKVKERLPTPSD
YQAFLKCLHIYSTEIITKTELQSLVADLLGKHPDLLEGFSEFLEYCEQDGRLEGFMSKSR
FNDRHASKIVKEDEKDKEQRRETDGAKEKDRCKEKYWGKSIQELDLSNCKRCTPSYRLLP
EDYPIPTASQKSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDML
LESVSSTAKRVEELLNAMNDNSIGGDGPIRIEDHFTVLNLRCIERIYGDHGLDTVDILRK
NPSLALPVILTRLKQKQEEWTKCRTDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSS
KSLVAEIKEIKEKKQKEDDTILSISTGSRHPITPNLVFDYTDSELHEDLYKLIKYSCEEV
CSSKEQLDKVLGLWTNFLEPMFGVTCRPHDSEATENDVLLKQHGPKINGAGIGESDGSPN
KEATTRNSKQSKVVSNRDANASPLRVNSSRTSLENADALPKEDGLAVIGQHLTSSDAAPA
MGADTVHGRGDITSARGARQGNGASDDGQVSKSNIDNMPASESDTLRSIPLGNGAFAGGS
TINGYNDDSVDPCKNEKEEGELSPNGDFEEDNFVAFRSGASHNGSLQYQARGAEEVGCQD
VAGENDADADDEDSENVSEAEEDVSGSESAADECSREEHEEEDNGEHDEHDGKAESEGEA
EGTSEGHYVGGDGNVLLMSDRVLLTSKPLTKYVASPVYGGALKYPRVFYGNETFYVLFRL
QQILYERLLSAKLNSASCDSKWRTGKDTGSIPYDRFMSALHSLLDGSADNSKFEDDCRSI
IGNQSYVLFTLDKLIFKLVKQLQTVSSDELDGKLLQLYEYERLRQPEKFVDSAYYENAHV
LLQEDSIYRFECTSSPTHLSMQLMDNGGDKSEVVAVAVDPNFAGYLHNDYLSVKHGKKES
SAVLLKRNKRKHADLDESTALGLAMEHVVLVNGLECKMASNSSKISYVLDTEDFFFRGGS
KRRKVSAGRLSRQYQARVERFHRVLTSL
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattgagagatgatatgtatgataccccgccgacatttaagcggccatttagt
tcttctcgtggagaatcctacagtcagtcacaagttcctggaaatggtctgggtggaggc
ggtggtggcagcagtgctggcggagctggtggtagtaacccaaagctgacaactagtgat
gcgttgacttatttaaaggaagttaaggaaatgttccaaggtcaaagggataagtatgac
atgttccttgatgttatgaaagacttcaaggctcaaaggattgatactactggtgtcata
gcaagagtgaaagacttgtttaaagggcatcctaagttgatccttggattcaacactttc
ctgcccaagggctatgaaataaccctcagtgatgaagatgaggctccaaagaaaacggtt
cagtttgaagaagctattagctttgtgaataaaataaagactcgtttccaaaatgatgat
catgtgtacaaatccttcctagacattttgaacatgtataggaaggagcacaagggaatc
aatgaggtgtaccatgaggttgccgtacttttcaatgaccatccggatctgctggatgag
ttcaccagattcttgccagatacttcaggaactgcatcagtagcacagacttcatttggc
aggccttcattccatcgttatgatgagaggagctcacctgttcccattcttaggcaatct
cacatggacaagcgcattcgtcgggataggatcattggtgctcatgcagaaagggacctt
agcattgagcgacctgatttggatgacgaaaaaacaatgatgaagttccataaagagcaa
aagagacgagctgaaaaagagagcagggacaggagaactcatgatcaggattataaagaa
cctgataatgagaacaatgaagatctaagcatgaaacgtcacattgataaaaggaaatct
gctcggaaggttgaggaatttggcggacctcatgaagataaagatgccttgaaaaatatg
catagcaaggagtttgaattctgtgacaaggtcaaggagagactaccaactccatctgat
tatcaggcattcttaaaatgtctccacatttatagcacagaaataattacaaagactgag
ttacaaagcttggttgctgatctgcttggaaagcatcctgatcttttggaaggcttcagt
gaatttctagagtattgtgaacaagatggacgtcttgaaggttttatgagtaagagtagg
tttaatgacaggcatgcttctaagatagtaaaggaagatgagaaagacaaagagcagagg
cgtgaaactgatggagctaaagaaaaggaccggtgcaaggagaaatactggggaaaatcc
atccaagaacttgacctttcaaactgcaaacgctgcactcctagttatcggcttctccct
gaagattatccaatacctacagcaagccaaaaatcagagcttggagctcaggttttaaat
gaccattgggtatctgtgacttcagggagtgaggactattctttcaagcacatgcgcaga
aatcagtatgaagaaagcctgtttcgttgtgaagatgataggtttgagctagacatgtta
ttggagtcggtgagttcaactgctaagcgtgtagaagagttattgaatgccatgaacgat
aattcaattggtggggatggtccaatccgtattgaggaccactttacagtcttaaactta
agatgcattgaacgaatctatggtgatcatggtctggatactgtggatattctacgtaaa
aatccatctcttgcgctgcctgttatactgacccgcttgaagcagaaacaggaggagtgg
accaagtgtcgcacagattttaacaaagtttgggctgagatctatgccaagaaccattat
aagtcacttgaccatcgaagtttctacttcaagcaacaagattcaaagaatcttagctcg
aaatccttagtggcggagatcaaagagattaaggagaaaaagcagaaagaagacgacact
attctttctatttccaccggaagtagacatcctataaccccgaatcttgtatttgattat
accgactctgaacttcatgaagacttgtacaaacttatcaagtattcgtgtgaagaggtt
tgctcctccaaagagcaattagataaagtattggggctatggaccaactttcttgagcca
atgttcggtgttacttgtcgtcctcacgactcggaagccactgagaatgatgtcttattg
aagcagcatggtccaaaaatcaatggagctggcattggtgaaagtgatggtagtcctaat
aaagaggctactactaggaattctaaacagtcaaaagttgtcagcaacagagatgctaat
gcttcccctctacgggtaaattcttcgaggacaagccttgaaaatgcagatgctctcccc
aaagaagatggtttggctgtgattggtcagcacctaactagttctgatgcagctcctgct
atgggagcagatactgttcatggaagaggggatataacttcagcacgtggcgcaagacag
ggtaatggtgcttctgacgatggtcaagtatccaagtctaacatcgataatatgccagca
tcagagagtgatactttaagatcaattccgttgggtaatggagcgtttgcaggaggctct
acaattaatgggtacaatgacgattcagttgatccctgtaaaaatgagaaagaagaaggt
gagttatcacctaatggtgatttcgaagaggacaattttgttgctttccgaagtggtgcc
tcgcacaacggaagtttgcaatatcaagccagaggtgctgaagaggtcggttgtcaggat
gttgctggtgaaaatgatgcagatgctgatgatgaagatagtgaaaatgtttctgaggct
gaagaagatgtttctggcagtgagtctgctgctgacgagtgctctagagaagagcatgag
gaagaggacaacggagagcatgatgaacatgatggtaaagctgagagtgaaggtgaggct
gaggggacgagtgaaggacactacgttggaggtgatggcaatgtgttgctaatgtctgat
cgggttttgcttacttcaaagccacttacaaaatatgtggcttcacctgtatatggtgga
gccttgaagtacccgcgggtgttctacggaaatgagacattctatgtgctttttaggcta
cagcagattctatatgaaagattattatcagcaaagctgaattcagcatcgtgtgattcg
aaatggagaactggaaaggatactggttctatcccctatgacagattcatgagtgcgctg
catagtttgctcgatggatctgcagataattcaaagtttgaggatgattgccgatcaatc
attggaaatcagtcatatgtgctattcacgttggacaagttgatatttaagctggtcaaa
cagcttcaaacagtctcgagtgatgagctggacggtaagctacttcagttgtatgaatat
gaaagattaaggcaacctgagaagtttgttgattcagcttattatgaaaatgctcatgtc
ctcctccaggaggatagcatttaccggtttgaatgtacatcttcgcctacccatctgtcc
atgcagttgatggataatggaggtgacaagtctgaagtagttgcagttgctgtagatccc
aattttgcaggttatctgcacaatgattatctgtcggttaaacatgggaaaaaggagtct
tctgcagttctgctgaagagaaataagaggaaacatgccgaccttgatgaatcaactgct
ttgggcctggcaatggaacatgttgttcttgtaaatggtctggaatgcaagatggcttca
aattcatcaaagatatcttatgtgcttgacacagaggacttctttttccgcgggggtagt
aaaagaagaaaagtttctgccggcagattgtctcgtcagtaccaggctagagtagaacgg
ttccatcgtgttctgacgtctttgtga
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