Capsicum annuum (peppers): 107860657
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Entry
107860657 CDS
T04646
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107860657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107860657
03009 Ribosome biogenesis [BR:
cann03009
]
107860657
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107860657
Spliceosome [BR:
cann03041
]
Complex A
U1 snRNP components
U1 related factors
107860657
Complex B
107860657
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Helicases
107860657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107860657
NCBI-ProteinID:
XP_016561573
LinkDB
All DBs
Position
2:152225507..152232789
Genome browser
AA seq
754 aa
AA seq
DB search
MAATATASSARPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPVATSHGNTT
PQHKSSVSVSSSVQSSSQSQRPDRDDNRGTNGSLSKFSSGEGIQTARGSELSRDGTAATK
GYCAPAGASNISPDAYRSQHEISVTGGDVPPPFTSFEATGFPSEILREIHQAGFPAPSPI
QAQSWPIALQGRDIVAVAKTGSGKTLGFLLPGFILLKQRRSNPQSGPTILVLSPTRELAT
QIQDEAVKFGRSSRITCTCLYGGAPKGPQLRDLDKGVDIVVATPGRLNDILEMRRVRLDQ
VSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMFTATWPKEVRKIAADLLVDPVQVN
IGNVDELVANKSITQYIEVLSYMEKQKRLDQILRSQEPGSKIIIFCSTKKMCDQLARNLT
RPFGAAAIHGDKSQGERDHVLSQFRTGRSPVLVATDVAARGLDVKDIRVVVNYDFPTGIE
DYVHRIGRTGRAGATGEAYTFFCDQDAKHASDLIKVLEGADQKVPAELRDMASRGGGMGR
ARRQWDSGSGGREGGHGGRYDSGYGGRDGGRGGWEAPSSERSGRGYDSDSRDSDRYGQGS
RDTDAPTSFHARSFHETMMQASQRRDRSRSRSPNKGSGWGDRKSRERSRSRSAERSDRAP
FQVPAGCSFHEIMMARSSSVASKPQSPLYSDNQSTSGGDSRGKVGGPYDDRQKGWERERS
PPRSQSDGKFGDGPSACNEEEEEGLIPEEDEARA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcaactgcatcttctgcgcgtccacgttatgcaccagaggaccccacc
cttcccaaaccttggaaaggcctagttgatggtaagactggatatctctatttttggaat
ccagagaccaatgttacccaatacgagaggcccgttgctacttctcatgggaatactact
ccacaacataaatcgtctgtatctgtaagctcatcagttcagagttcctctcaaagtcaa
cgtcctgaccgtgatgacaacagaggtaccaatggtagcttgagcaagttttcatctgga
gagggtattcagactgcaagaggaagtgagctttcccgcgatggaacagctgcaaccaaa
ggctattgtgctccagctggtgcaagtaacatatctcctgatgcctatcgcagtcagcat
gaaatttctgttaccggaggtgatgtgcccccacctttcacatcgtttgaagctactggg
tttccttcggagattttgagagagatacatcaagctgggtttcctgctccttcccctata
caggcacagtcatggcccattgcgcttcagggccgcgacatagtagctgttgcaaagact
gggtctgggaaaactttgggtttcttgcttcctggctttattcttctaaagcaacgtcgg
agtaatcctcaatcagggccaactattttggttctgtcaccaacaagagagttagccaca
cagatacaagatgaagctgtgaagtttggtagatcttcaaggataacttgcacgtgtcta
tatggaggcgccccaaaaggacctcagctgcgagatctggacaagggagtagatattgtt
gttgctacgcctggtcgtttgaatgatattttggagatgagaagagttaggctggatcaa
gtttcttacttggtgttagatgaagcggatcgtatgctggacatggggtttgaacctcaa
ataaggaagattgtgaaggaggtgcctacgcggcgacaaacattgatgttcactgctaca
tggccaaaggaggttcgcaaaattgcagcggatctattggttgatccagttcaggttaac
attgggaatgttgatgagctcgttgcgaacaaatctataacacagtacattgaagtctta
tcatatatggagaaacaaaagcggctggaccagatcttgagatcccaagagcctggatca
aaaatcattatcttctgctcaacaaagaaaatgtgtgaccaacttgctcgcaatctaacg
cgcccatttggagctgctgcaattcacggcgataaatctcagggtgagagggatcatgtg
ttgagccagttccgcactggtaggtcccccgttcttgttgccactgatgttgctgctcgg
ggcttggatgtcaaagatatcagggtggtggtcaactatgattttccaactggaatagag
gattatgttcacagaataggaagaactggtcgggctggtgcgactggtgaggcttacaca
tttttctgtgaccaggatgctaaacatgcttcagatcttattaaagtattagaaggagcg
gatcagaaagtgcctgctgaactacgcgatatggcttctcgaggtggtggtatgggaagg
gctagacgtcaatgggattctggctcaggtggccgtgaaggaggacatgggggacgttat
gattccggctatggtggacgagatggcggaaggggtggttgggaagccccatcatcggaa
agaagtgggcgtggttatgactcagattcacgtgacagtgatagatatggtcaaggctct
cgtgataccgatgctccaacgagtttccatgctcgtagcttccatgaaactatgatgcag
gcttcacagagacgtgatcgaagtcggagcagaagcccaaataaaggttcgggatggggt
gatagaaaaagcagggagcgcagtcgtagccgtagtgctgaaagatctgaccgggctcct
tttcaagtcccagcaggatgcagtttccatgaaatcatgatggctagatcatcctcagta
gcctcaaagccccaatcacccctttactctgataaccaatctacatcaggtggtgattcc
agaggaaaagttggaggaccatatgatgatcgccaaaagggctgggaaagagaaagatcc
ccacctagatcgcagagtgatgggaaatttggcgatggacccagtgcttgcaatgaggaa
gaggaagaaggtttgattcctgaagaagacgaagcaagagcctaa
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