Capsicum annuum (peppers): 107860668
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Entry
107860668 CDS
T04646
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107860668
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107860668
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107860668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
HHH_5
Cdd1
AAA_22
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
107860668
NCBI-ProteinID:
XP_016561591
LinkDB
All DBs
Position
2:complement(152371961..152382406)
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AA seq
1224 aa
AA seq
DB search
MDGYALKSVSDLPPVFRSTFSFRYFNSLQSECFPACFLSDMNMVISAPTGSGKTVLFELC
ILRLLSRFISGEGKFIHTKGALKTIYVAPSKALVQEKLRNWNQKLGSWGINCLELTGDNE
SYKITDIQVADVILTTPEKFDAVTRYRINDGGLSFFGDIALVLIDEVHLLNDPRGAALEA
ILSRIKMLSRKPELKSSALANVRFLAVSATIPNIDDLAEWLMVPMQGVKRFGEEMRPVKL
TTKVFGYTPAKNDFLFEKRLQNYVFDILMQHSRGKSALVFCSTRKGAQEAARQLSQTAMT
YGHSNPFIKSREQQERLREASLSCSDKQMQSYILYGVGYHNGGLSMNDRNLIEGLFLNGD
VQVLCTTNTLAHGINLPAHTVVIKSTQYFNKEKGIYMEYDRSTILQMSGRAGRPPFDDTG
VVIIMTRKETVHLYENLLSGCELVESQLLPCVTEHLTAEIVQLTVSDITGAIEWMKCSYL
YVRMKKNPEKYGVRKGLIGDRLERHMQDICVQNVNELSRYQLIWTDEDGFLLKPLEPGKL
MTKYYLKFDTMKHIMQAPGNCSIEDALQIVCRAEELGWIQLRRNEKKLLNDINIDKDNRL
RFHILGDKAKRKKRVQTREEKIFVLANDCLTGDPFIHDLSLSQDMNAVCANGYRIAKCMK
EYFLYRKNYRGALSSALLTKSLYKKVWDDSPYLLKQLPGIGMVTAKALHSMGVKSFSSLS
DADPRKIEMVTGRKYPFGNHIKESLLSLPPEVQMRVEETEGQRQGRSKVMVTLIRLSQPV
QTTERHYADMVVAVEEDNLVLFHEKIRVDDFPSPYSKTVMVPSPQQGKLTVKADLIFNEF
IGVDLHQKLVLIKEINLNFVMKYRTKQLSSFQENDGCIIEDTENTVQASCQVSHRLTEVD
RISDMPSFKLIDEDLDEVIPASTVEDDECKIIDEKTIFDHIREKAKNLPALTSLKGTCSP
SLETLNLIRKRTREKQLLVENAAGVSDEVRRTKVPCHRVVVQSAEYIDLEANRPFSNKDQ
RPYSHHASNAIYLAGETGELFFETGSVPSETMAEETIFKYNPIDSNNFHSFENVKNTEHK
LLSMANETCIIHQPEHNSAIFGFQETIPTKVVENAAVIMDLEPMKTKANAIKLIEEVEDL
TLYGYTPGTSEKTDLSLETSRKDAEGKSRLLSSADDYVIRNKVGNPLRSPNFQEQQGTCS
VQVGEISQANPFLGFKSIFAFLFE
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggatggctatgcacttaagtctgtgtcggacttgcctcctgttttccgttcaactttc
agtttcagatattttaactcgctgcagagtgaatgctttcctgcttgtttcctgtcggat
atgaacatggtaatctcagcaccaacaggaagtgggaaaactgtgctttttgaactatgc
attttgaggcttctctcaaggtttatctcaggagagggaaaatttattcacacaaagggt
gctctgaagactatatatgttgcaccatcaaaagcattggtacaagagaaacttcgtaat
tggaaccagaagcttggttcatgggggataaattgcttggaactgacaggggacaatgag
tcctacaagatcacggatatacaggtcgctgatgtaatccttaccactcctgagaagttt
gatgctgtgactcgttaccgcataaatgatggaggcctgagcttttttggtgatattgcg
ttagtgcttattgatgaagtccatttattgaatgatcctcgtggagcagctttggaggca
attctcagtagaattaaaatgctttcccgcaaacctgaactgaaatcaagtgctctagct
aatgtccgatttttggctgtttctgcaaccattccaaacattgatgaccttgcagaatgg
ctcatggttcccatgcaaggagtaaaaaggtttggggaagaaatgagaccagtgaagttg
actaccaaagtttttggatacactccggcaaagaatgactttctttttgaaaagcgccta
cagaactatgtctttgatatcctcatgcaacattctagaggaaaatctgctctagttttt
tgttcaaccagaaaaggagcacaagaggcagcacgacagctctctcagacagctatgacc
tatggtcattcaaatccttttatcaaaagcagagagcaacaggaaaggttgagggaagct
tcactatcatgcagtgacaaacaaatgcagtcttatattctttatggtgttggttatcac
aatggtggtctttctatgaatgaccgcaacctcattgaaggcctatttctgaatggtgac
gttcaagtgctgtgcactacaaatactcttgcccatggaattaatctaccagcacatact
gttgtgattaaatcaactcagtacttcaataaggaaaaagggatctacatggaatatgac
agatcaactattctgcagatgtcaggaagagcaggccgaccaccgtttgatgacacggga
gtggtcataatcatgaccagaaaagaaactgttcacttgtacgagaatttattaagtgga
tgcgaattggtggaatcacaattgcttccatgtgttacagagcacctaacagcagagatt
gttcaactgaccgtgtcagatataacaggagcaattgaatggatgaaatgctcatatttg
tatgtaagaatgaaaaagaatccagagaaatatggagtaaggaaagggctaattggcgac
cgtttagagaggcatatgcaagatatttgtgttcagaatgtaaatgagttgtcaaggtat
caattgatttggacagatgaagatggtttcctcttaaagcctcttgaacctggaaagttg
atgacgaaatattatctgaaatttgacacgatgaagcacatcatgcaagcccctggaaac
tgtagcatagaggatgcacttcaaattgtttgccgtgctgaggaacttggatggatacaa
ctgaggcgcaatgagaagaagctcctgaatgacataaacattgacaaagacaatcggctt
cgctttcacatccttggggacaaagcgaaaagaaaaaagcgggtccaaaccagagaagag
aagatatttgttttggcaaatgactgcctaacaggggaccctttcatccatgatttatcc
ctaagccaggatatgaacgctgtatgtgcaaatggatatagaattgcgaagtgcatgaaa
gagtatttcctatacaggaagaactatcgaggagctttgagttcagcacttctaaccaaa
tctttgtataagaaggtctgggatgacagtccatacttgctgaaacaattacctggtatt
ggaatggtgacagcaaaggcactgcattcaatgggagtaaaatcattttcctcgctctcc
gatgcagatccaaggaaaatagagatggtcactggcagaaaatatccttttgggaatcat
ataaaagagtcactactatcattacccccagaagttcagatgagggttgaggaaactgag
ggccaaaggcaagggaggtccaaggttatggtaacactgattaggttgtcacaacctgtg
caaacaactgaacgacattatgctgatatggtggttgccgttgaagaagataatctggta
ctgtttcatgagaaaataagggtggatgactttcctagcccctatagcaagacagttatg
gtgccaagtccacagcaagggaagctgactgttaaagcagatctgatatttaatgaattt
attggtgttgatcttcatcaaaagcttgtattgataaaggagattaaccttaatttcgtg
atgaagtacagaaccaagcaactctcttccttccaggaaaatgatggctgtatcatagag
gacacagagaatacagttcaagcttcatgccaagtgtctcaccgtttaactgaagttgat
aggatctcagacatgcccagtttcaagctaatagatgaagatctagacgaagtgatacct
gcttctacggttgaagatgatgaatgcaaaatcatagacgaaaagactatatttgaccat
atacgtgagaaggctaaaaacctccctgctttgacctcactgaaaggtacgtgttcacca
tcattggagactttgaatctcatcagaaagcgcactcgcgagaagcagcttttggttgag
aatgctgcaggagtatcagacgaagtgagaagaacgaaagtcccatgtcaccgtgtggtc
gttcagtctgcagaatatatcgatctagaagcaaatagaccattttctaacaaagatcag
agaccatatagccatcacgcctctaatgccatttacctggctggtgaaacaggtgagctt
ttctttgaaactgggagtgtgccatccgaaacaatggctgaagaaacgatattcaaatat
aaccctatagattctaacaacttccacagctttgagaatgtgaagaacacagaacacaag
ttactcagtatggccaatgaaacctgcataattcatcaacctgagcataattctgccatc
tttgggtttcaagagacaattccaacaaaagttgtggaaaatgcagcagttattatggat
cttgagcctatgaagacaaaagcaaatgcaattaaactaatcgaagaggtcgaggatcta
actctttatggatacacacctggtacaagtgaaaaaactgatctttctttggagacctca
agaaaagatgcagagggaaaatcaagattgttgtcatctgcagatgattacgtcataagg
aataaagtgggaaatccactacgttctccaaatttccaggaacaacagggcacttgttca
gtacaagtgggagaaatcagccaagcaaatccctttcttgggtttaaaagcatttttgca
tttctatttgagtga
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