KEGG   Capsicum annuum (peppers): 107860681
Entry
107860681         CDS       T04646                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107860681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107860681
   03041 Spliceosome [BR:cann03041]
    107860681
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107860681
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107860681
Spliceosome [BR:cann03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107860681
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_RdRP1_2 Nup35_RRM_2 BRAP2 RRM_Nup35 RRM_SRRT
Other DBs
NCBI-GeneID: 107860681
NCBI-ProteinID: XP_016561611
LinkDB
Position
2
AA seq 394 aa
MEEQNGTLNGVKFELEEEETNDDRTTTPDHQNDAGAGNRASQPLTGDGASPGKIFIGGLA
RETTSAQFVKHFGKYGEIIDSVIMKERRTGLPRGFGFVTYADPSVVDKVIEDDHVINGKQ
VEIKRTIPRGVGGSSSKDFKTKKIFVGGIPTTITEDEFRDFFLKFGEVKEHQIMRDHSSN
RSRGFGFITFDTEKSVDDILANGNRLDFVGTQVEIKKAEPKRPNAPQSAPFRRQGPPRAG
FGGGFSDSYGGYGDSGFGAGPYRSGGPYGGRSGAFGGYSGAGMGGYGAYGGSGAYGGGGG
FREEASFGYSSRYGGGAFGRGYDGGYGGPGEGYGGYGAGSGGYGAGSGAYGSGYGSGLGG
GYGGDGTGGSMYGGSRGSYGGAGAGSGRYHPYGR
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggaggaacaaaatggtactttaaatggtgttaaatttgagctggaggaagaagaaact
aatgacgaccgaactactactcccgaccatcaaaacgacgccggcgccggtaaccgcgct
tctcaaccactcaccggagatggtgctagtcctggaaagatatttattgggggtttggct
agagagacgacttcggctcaatttgtcaagcactttggtaaatatggtgaaattatcgac
tccgtgattatgaaggaaaggcgaacaggactgccacgcgggtttggttttgtgacttat
gctgacccctctgtggtggataaagtcattgaggatgaccatgttataaatggaaagcaa
gtggaaatcaagcgaactatacctagaggagtaggaggttccagctcaaaagatttcaag
acgaagaagatctttgtgggcggcattccaacaacaattactgaagatgaattcagagac
tttttcttaaagtttggagaggtgaaagagcaccagatcatgcgtgaccattctagtaat
cgttctcgtggctttggattcattacttttgacacagaaaaatctgttgatgatatcttg
gctaatggaaacaggcttgattttgttggaacccaggtggaaatcaagaaggctgagcct
aagagacctaatgcgccacaatcagccccattcaggcgccaaggtcctccgagagctgga
tttggtggtggattttcagactcttatggtggatatggagactctggttttggtgctggt
ccttataggtctggtggcccctatggtggtagatccggtgcatttggtggatatagtgga
gccggaatgggcggatatggagcgtatggtggcagtggtgcctatggaggaggcggcggc
ttcagggaggaggcttcttttgggtattctagccgttatggtggtggagcctttggtaga
ggatatgatggtggctacggagggccaggtgaaggttatggaggatatggtgctggtagt
ggtggatatggtgccggtagtggtgcatatggcagtggatatggttctggtcttggcggt
ggatatggaggagatggtaccggaggttcaatgtacggaggtagtaggggaagttacggt
ggtgctggtgctggttctggtagatatcacccttatgggagatag

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