Capsicum annuum (peppers): 107860826
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Entry
107860826 CDS
T04646
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107860826
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107860826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Rgs_repeat
Motif
Other DBs
NCBI-GeneID:
107860826
NCBI-ProteinID:
XP_016561802
UniProt:
A0A1U8FRI0
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Position
2
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AA seq
375 aa
AA seq
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MEKLISSLYLVSWLLIFSISSSHGKRMNVIDSCWRSNPKWSTNRQALANCAKGFGSGAIG
GKNGAIYIVNDASDDPVNPKQGTLRYGVIQTRPLWIIFLQNMLITLKNELIISSFKTIDG
RGAKVDIAYGPCLTIQFVKHVIVHGINLHDCRIAKPGPVRVSPIQVLQRSGTDGDAITVY
TSSNIWIDHCSFSRAADGLIDVVHASTGITVSNSYFTQHDHVILLGNQEGLIRDKMMKVT
IAFNHFGPGLFQRMPTIRYGYAHVANNYYEPWKVYAIGGACNPTILSEGNYFIASRTKKQ
VTHRDFASPKEWGKWNWKSYKDVFINGAFFTASGKGSANPKYTSSSQSFSVAHGSQVPYL
TSDAGPLKCFPNRPC
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgatcagttccctctatttggtttcatggcttctaattttttctatttct
tcatcgcatgggaaaagaatgaacgttatagattcatgttggcgatcaaatcccaaatgg
tctacaaatcgccaagctttagccaattgtgctaaaggctttggtagtggtgccattggg
ggaaaaaatggagcaatttacatcgtgaatgatgcttccgatgatcccgtcaaccctaag
caaggcacactccgatacggagtaattcaaacaagaccactttggattattttcctacaa
aacatgcttatcactcttaaaaatgagcttataattagttcatttaaaacaatagatgga
agaggtgccaaagtggatatagcttacggaccttgtttaactattcaatttgtgaaacat
gtgattgttcatggaattaacttacatgattgtaggattgctaagcctggacctgttaga
gttagtcctattcaggttctacagaggtctggtacagatggagatgctatcacggtatat
acatcttcaaatatttggatcgatcattgttctttttcccgtgctgctgatggtctcatt
gatgtagttcatgcttctactggtattactgtctctaacagctactttacccaacatgac
catgtgatactgctgggaaaccaagaaggattgattcgtgacaaaatgatgaaagtcaca
attgcgttcaatcattttggtcctggcctttttcaaaggatgccaacgattcggtatggc
tatgctcatgtggctaacaattactacgaaccttggaaggtttatgcaattggtggagcc
tgtaatccaactattcttagtgaaggaaattactttattgcctctcgcaccaaaaaacag
gttactcatagggattttgctagtccaaaggagtggggaaagtggaattggaagtcgtac
aaagatgtattcatcaatggagcttttttcactgcttcaggaaaaggaagtgcaaatcca
aagtatacttcatcatcgcagtcatttagtgttgctcatggatcccaagttccttatttg
acttctgatgctggccctcttaaatgttttcctaatcgaccttgctaa
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