Capsicum annuum (peppers): 107861041
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Entry
107861041 CDS
T04646
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Module
cann_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107861041
Enzymes [BR:
cann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107861041
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107861041
NCBI-ProteinID:
XP_016561926
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Position
2
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AA seq
389 aa
AA seq
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MSPLVIVPLLFSLFLNLSLAENTINVQNYGAKSNGKTDSSKAFVNAWAVACSSTSPTTIY
VPRGNYLIRTAYFNGQTCKSKAINIRIDGTLLAPSDYNVIGNAENWIKFEKVTGVSIYGG
TFDGQGSGLWACKNSHKNCPKGTTALTFYDSNNIILSGVTTQNSQMFHILIDTCHNVKLQ
GVKISAPGNSPNTDGIHVKLSTGVSIMNSHIGTGDDCISIGPGNSNLWIEGIACGPGHGI
SIGSLGWKIEESGVQNVTVKTVTFTETTNGVRVKTWARPSNGFVRHVLFQHIVMINVQNP
IIIDQNYCPNHEPCPRQGSGIQISDITYQDIHGTSATKTAVKLDCSKTNPCSSIKLEDLN
LSYKGQSTEASCINARGRVSGLDKPTNCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagtaattgttccacttctcttcagcctcttcctcaacttatcattagca
gaaaataccatcaatgtccaaaattatggagcaaaatccaatggaaaaactgattcatca
aaagcctttgtgaatgcatgggcagtagcctgttcttcaacaagcccgaccactatttat
gtgccacgtggaaattacttgattcgcactgcatacttcaatggccaaacatgcaagagc
aaggctattaatatacgcattgatgggactctcttagctccctctgattataatgttatt
ggcaatgccgaaaattggataaaatttgaaaaagtcactggagtttctatctacggtgga
acctttgatggccaaggttctggcctttgggcttgcaagaactctcacaagaattgccct
aaggggactacggctttgactttttacgattcaaacaacattatactgagtggagtaact
acacaaaatagccaaatgtttcatattttgatagatacatgtcataatgtgaagctacaa
ggagtgaagatatcggctcctggaaatagcccgaacactgatggaattcatgtaaagtta
tcgacaggagtaagcattatgaactcacatattggtactggagatgactgtatctctatt
ggccctggaaattctaacttatggattgaaggcattgcatgtggccctggacatggaatt
agcattggaagcttaggctggaaaatagaagaatcaggagttcaaaatgtgacagttaag
accgtgactttcactgaaacaacaaatggtgtgagagtgaagacttgggcaaggcctagc
aatggcttcgtcagacatgttctctttcagcacattgttatgattaatgttcaaaatcca
atcatcatagaccaaaattactgccctaatcatgaaccttgtcctcgtcagggctcaggc
atacagataagtgatataacatatcaagacatacatggaacatcggctacgaaaactgca
gtgaaacttgattgtagtaaaaccaatccatgcagcagcataaaacttgaagacttgaat
cttagttacaaaggtcaatcgactgaagcttcatgcattaatgctagaggaagagtttct
ggtttagacaaacctaccaattgcttataa
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