KEGG   Capsicum annuum (peppers): 107861721
Entry
107861721         CDS       T04646                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107861721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cann03019]
    107861721
   03041 Spliceosome [BR:cann03041]
    107861721
Messenger RNA biogenesis [BR:cann03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107861721
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107861721
Spliceosome [BR:cann03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107861721
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 NID
Other DBs
NCBI-GeneID: 107861721
NCBI-ProteinID: XP_016562554
LinkDB
Position
3:268511547..268515262
AA seq 375 aa
MDYDVAEQNVAVYGDNPEEQERNGGSAGNELKHSNDDSFAGKLFVGGIAWETGEESFRKY
FSRFGEIADCVIMMDKVSGRPRGFGFVTFADPEVANKVLEEDHVIDGRTVEVKRTVPKED
MQVKGAPKTKKIFVGGLPVSLTEDDLKEYFSSYGHVVEHQIMLDRETGRSRGFGFVTFAS
ENAVEEVLNSGRMHEIHGKQVEIKKAEPKRAGAEHASESRQHRGGSGSRSYNGFGGSEGG
YVAGYGRGSYGGYGGYGGGGGYGGYGNIGGSYGGGGAGYFAGYGGYGYGFGFSGPMYGAA
GYGGASYGAPGSYGGPAGYAGGRGYTSGDDGSWYGGSKGSSSFNAKGYDSGGSTGGAKAY
GNGAAAGGRFHPYRN
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggattatgatgtagctgaacaaaacgttgccgtttacggcgataacccagaagagcag
gaaaggaacggtggtagtgcaggcaatgaattaaagcattcaaacgatgattcttttgca
ggaaagcttttcgttggaggcattgcttgggagaccggagaagaatcttttaggaagtat
ttcagcaggtttggagagatagcagattgtgtaataatgatggataaggtctctggaagg
ccacggggattcggatttgtaacatttgcagacccagaagttgcaaataaggttttagag
gaagaccacgtcatagatggtagaacggtggaagtgaagaggacagtacctaaggaggac
atgcaagttaaaggagctccaaaaacaaagaaaatttttgtcggcggtcttccagtttct
ttaactgaagatgacttgaaggaatatttttcttcttatggccatgttgtggagcaccaa
atcatgctggatcgtgagactggtcgatcccgaggctttggcttcgtgacttttgctagt
gaaaatgctgttgaagaagttttaaacagtggccgtatgcatgaaatccatggcaaacaa
gttgaaattaagaaggctgagccaaaaagagctggtgctgaacatgcaagtgagagcagg
cagcatcgtggtgggagtggttcgagatcgtataatggctttggtggatctgaaggaggg
tatgtggccggatatggtagagggtcgtatggtggatatggcggatatggtggcggtggt
ggatatggtggttatggaaacattggaggaagttatggcgggggtggtgcaggatatttc
gctggctatggtggatatggttatggatttgggtttagtgggcctatgtatggggcagct
ggatacggtggcgctagctatggtgctcctggtagctatggtggtcctgctgggtatgct
ggcggtagaggatatacaagcggtgatgatggtagctggtatggtggttctaaaggctct
tcatctttcaatgctaaagggtatgactctggtggcagcactggaggtgctaaagcatat
ggtaatggtgctgctgcaggcggaaggtttcacccttaccggaattga

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