Capsicum annuum (peppers): 107861730
Help
Entry
107861730 CDS
T04646
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107861730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107861730
03110 Chaperones and folding catalysts [BR:
cann03110
]
107861730
03029 Mitochondrial biogenesis [BR:
cann03029
]
107861730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cann04147
]
107861730
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107861730
Messenger RNA biogenesis [BR:
cann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107861730
Chaperones and folding catalysts [BR:
cann03110
]
Heat shock proteins
HSP60 / Chaperonin
107861730
Mitochondrial biogenesis [BR:
cann03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107861730
Exosome [BR:
cann04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107861730
Exosomal proteins of other body fluids (saliva and urine)
107861730
Exosomal proteins of breast cancer cells
107861730
Exosomal proteins of colorectal cancer cells
107861730
Exosomal proteins of bladder cancer cells
107861730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
107861730
NCBI-ProteinID:
XP_047266129
LinkDB
All DBs
Position
3:268417761..268424011
Genome browser
AA seq
431 aa
AA seq
DB search
MFRAAATVASSIRSSTSRKLVSSRFISSRNYVAKDISFGSHARLAMLQGVNELSEAVKVT
MGPKGRNVIIEKSPGNPKVTKDGVTVAKSINFSEKAKNLGADLVKQVANATNSVAGDGTT
CATVLTQAIFIEGCKAVAAGVSVMDLRSGINMAVDAVVADLKSRAVMISTPEEITQVATI
SANGEHEIGELIARAMEKVGKEGVITVADGNTLDNDLEVVEGMKLGRGYISPYFVTDEKT
QKCELENPLILIHDKKISDLNSLVRILELALKRRRPLLIVAEDVESDALAMLILNKHRAG
IKVCAIKAPGFGDNRRANLEDLAVLTGGEVISEERGLDLNKVQIDMLGTAKKVTVSLDGT
LVLHGGGDKKLIEERCEQLRIAKEKSSAMFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVGTNKW
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagctgctgcaactgttgcttcatcaatcaggtcctcaacttccaggaaattg
gtttctagtaggttcatctccagcagaaattatgtagccaaggatatcagttttggtagc
cacgcacggttagccatgttacaaggggttaatgagctctcagaagctgtaaaagtcact
atgggaccaaagggtcgtaatgtgattattgagaaaagcccagggaatcccaaggtcaca
aaggatggtgtcactgtagccaaaagcatcaactttagtgaaaaggcaaagaatttggga
gctgatcttgtgaagcaggtcgcaaatgctactaattcagttgctggagatggtaccacc
tgtgcaactgtgcttactcaggcaatttttatagaaggttgcaaagcagttgctgcaggt
gtaagcgtgatggatttgcgtagtggtattaacatggctgttgatgctgttgttgctgac
ttgaagagcagagcagtcatgattagcaccccggaggagattacacaggtggcaactata
tctgctaatggtgaacatgaaattggggaactaatagctcgagccatggaaaaagttggg
aaggaaggagtgattactgttgctgatggaaataccttagataatgatttggaagtggtg
gaaggcatgaagcttggccgaggttatatatctccttattttgtcacggatgagaagact
caaaaatgtgaattggaaaatccattgatccttatccatgacaagaaaatctcagatttg
aactcacttgtgcggatattggagcttgctcttaagagaaggaggcctctgttgattgtt
gctgaagatgtggaaagtgatgcattagctatgcttatcctaaataagcatcgtgctggg
attaaggtctgtgccattaaagctcctggttttggggataatagaagagccaacttggag
gaccttgcagttcttacaggaggagaggtcattagtgaagaacgtggtttggatctgaac
aaagttcaaattgatatgcttggtactgccaaaaaggttactgtttcccttgatggcacc
ttagttctgcatggaggtggggacaaaaaactaattgaagaaaggtgtgagcagctaagg
atagcgaaggaaaagagtagtgccatgtttgataaggagaaagctcaggagcgtttatca
aagctatctggtggtgttgctgtgttcaaggtcggaggggccagtgaggcggaagttgga
gaaaggaaagatagggtaggtacgaacaaatggtga
DBGET
integrated database retrieval system
