Capsicum annuum (peppers): 107861738
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Entry
107861738 CDS
T04646
Name
(RefSeq) WD-40 repeat-containing protein MSI4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
cann03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107861738
03083 Polycomb repressive complex
107861738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107861738
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107861738
Histone modification proteins
HAT complexes
HATB complex
107861738
HDAC complexes
Sin3A-HDAC complex
107861738
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107861738
PRC2.2
107861738
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107861738
Heterochromatin formation proteins
Other heterochromatin formation proteins
107861738
Chromatin remodeling factors
NuRD complex
107861738
NuRF complex
107861738
NuRF complex (fruit fly)
107861738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
DUF2110_C
Motif
Other DBs
NCBI-GeneID:
107861738
NCBI-ProteinID:
XP_016562575
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All DBs
Position
3:complement(268277408..268300688)
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AA seq
465 aa
AA seq
DB search
MNGRTDKGRGGEEEEALQSVEERYTEWKSLIPVLYDWLANHNLVWPSLSCRWGPQFEQAT
YKNRQRLYLSEQTDGSCPNTLVIANCEIVKPRVAAALHISQFNEESRSPFVKMFKTIIHP
GEVNRIRELPQDSNIVATHTDSPDVLIWNVESQPNRNATLEVNNFSRPDLVLTGHQDNAE
FALAIGHSEPFVLSGGKDKSVVLWSICDHVSTLAADQGDAKSPGSGASNPKPSAEGPTVQ
ARGIFQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGCSPVVKVEKAHNADLHCV
DWNPHDVNYILTGSADNTIRMFDRRNLTSGGVGSPIHIFEAHTAAVLCVQWSPDKSSVFG
SSAEDGVLNIWDHERIGKMESSAVTERETSPPGLFFCHAGHRDKVVDFHWNVSDPWTIVS
VSDDGEKTGGGGTLQIWRMIDLIYRPDDEVLSEMERFKSHLPTCT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaagaacagacaaaggcagaggaggagaagaagaagaggcgctgcagtcggtg
gaggagcgttatacggagtggaaatcactcattcctgttctctacgattggcttgctaat
cataacctcgtttggccttccctctcttgtcgatggggtccccagtttgagcaagcaact
tacaaaaaccgccagcgcctctacctttccgagcagactgatggtagctgtccaaatacg
cttgtcatagctaattgtgaaattgtaaagcctagggttgcagcagcactacacatatct
cagttcaacgaagaatcacgttcgccttttgtaaaaatgttcaagactattattcatcct
ggtgaggtgaatcgaattagggaactgcctcaggatagcaacatagtggccacacacacg
gacagtcctgatgttcttatttggaatgttgagtctcagcctaatcgtaatgctaccttg
gaagtaaataatttttctcgaccagacttggtgttgactggacatcaagacaatgctgaa
tttgcgcttgcaataggccattctgagccttttgtgctctctggagggaaggataaatcg
gttgttctatggagcatttgtgatcatgtgtctactttggcagcagaccagggtgatgca
aagtctcctggatctggagcaagtaacccgaaaccttctgcagaaggccctactgttcaa
gctcgaggtattttccaaggacatgatgatactgtagaagatgttcagttttgcccttcc
agtgcacaggagttttgtagtgttggagatgattcctgcctaatactgtgggatgcaaga
actggttgttctcctgttgtcaaggtagaaaaggctcacaatgctgatcttcattgtgtt
gattggaatcctcacgatgtaaattatattttgactgggtcggcagacaacaccatccgc
atgtttgatcgacgaaatctcacttctgggggtgtgggatcgcctatacatatctttgag
gcccatactgctgctgtgctttgtgtacagtggtccccagataaatcatcagtctttgga
agttcggcagaagatggtgtcctgaacatctgggatcatgaaaggattggtaagatggag
agctctgctgttacagaacgcgaaacatctcctcctggcttattcttttgtcatgctgga
catagggataaggtggtcgacttccactggaatgtgtcagatccatggacgattgttagt
gtctcagatgatggtgaaaaaactggtggaggtggtacattacagatatggcgaatgatt
gatctcatttacagaccagatgatgaggttctaagtgaaatggagaggttcaagtctcac
ctgcctacttgtacttaa
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