Capsicum annuum (peppers): 107861947
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Entry
107861947 CDS
T04646
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Module
cann_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107861947
Enzymes [BR:
cann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107861947
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
107861947
NCBI-ProteinID:
XP_016562844
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Position
3:complement(257804001..257806896)
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AA seq
423 aa
AA seq
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MHKIYTSYYAWFNCTIGIMMITLPVYFCIFLVLLCMVSSVWGADKTFNVINFGAVGDGKT
DDLPAFLKAWEAVCQSESSRVILVIPKRKKFLLTPSSIDGPCKPSRIHIQVSGNIIAPNT
KSAWDGRATNAWLTFSNIDHLTVNGHGVFDGRGHLWWSNPCLNDNTSQETQCKGPTALIF
RRCDQLRVRGVTIIRSARSHIILTACNEVSIAKIRIMSPGDSPNTDGIDVSASTNVRIHN
SLIATGDDCVAIGGGSSKVNISGITCGPGHGISIGSLGEGGFEVVEDVNVRNCTIKGTLT
GVRIKTWQGGEGYARRIAFEGIKLDAVNNPLIIDQFYCPSRVNCKNDTAAVALSDITFRG
IVGTSLMDEVINLSCSETIGCKNILVDRVYISSVDGKPVHAKCINAHGRYTHTSPAVKCL
QPP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcataagatttacacatcgtactatgcatggttcaattgtactatagggatcatgatg
attactttgccagtttacttttgcattttcttggttttgttgtgcatggtttcttctgta
tggggagctgataaaactttcaatgtcatcaattttggcgccgttggagatgggaaaact
gatgatctcccggctttcctcaaggcatgggaagctgtgtgccaatcagaatccagtcgt
gtaatacttgttataccaaaaagaaagaaattcttactaacaccttcatcaattgatggt
ccttgcaagccctcacgtatccatattcaggtatcaggaaatataattgcacctaacacg
aaatcggcatgggatggacgtgcaaccaatgcgtggctcactttctcgaatatcgaccat
cttactgttaacggccatggagtttttgatggccgaggccatctatggtggtctaatcct
tgtttgaatgataacacatcccaggagacacaatgcaaaggaccaactgcattgattttc
agaagatgtgatcagcttcgagttaggggagtaacgattattagaagtgctagaagtcat
atcatattgactgcttgcaatgaagttagtattgctaaaatacgtattatgtcccctggc
gatagtcctaacaccgatggaattgatgtttctgctagcacaaatgtacgaatacacaac
tctctcattgcaacaggcgacgactgtgttgcaataggaggaggatcatccaaggttaat
attagtggcataacatgcggaccaggccatggtattagcattggatccttgggagaagga
ggatttgaagtagtggaagatgtgaatgtacgaaattgtacaataaaaggcaccttaaca
ggagtaaggattaagacctggcagggaggcgaagggtatgcaaggaggatagcttttgaa
ggaattaaacttgatgcagtcaacaatcccctaatcatcgaccagttctactgtcccagc
agagtcaattgcaaaaatgatacagctgcagttgcattgagtgacataacatttagagga
atagtagggacttccctgatggatgaggtgataaatctgagctgcagtgagactattggc
tgcaaaaacatacttgttgatcgagtatatatatcctctgttgatggtaagcctgttcac
gccaagtgcatcaatgctcatggaagatacactcatactagccctgctgtgaaatgtcta
cagcctccatag
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