Capsicum annuum (peppers): 107862795
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Entry
107862795 CDS
T04646
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107862795
04121 Ubiquitin system [BR:
cann04121
]
107862795
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107862795
Membrane trafficking [BR:
cann04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107862795
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107862795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-Nse
zf-RING-like
Rad50_zn_hook
zf-RING_Vps41
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107862795
NCBI-ProteinID:
XP_016563938
LinkDB
All DBs
Position
3:239924076..239927788
Genome browser
AA seq
388 aa
AA seq
DB search
MSSAGEVGGAAGNRPQNYHCYQCEQTVTITTLPNSELCCPNCNGTFLEESETATVSNTNV
GNHPFFSAATTDDLPFGVGGGGGGGFPIVFSSTGNTGSGGSVGFDDLSALFGGMAGGGSG
AFTGRGSNQFDPFAFLNNYFNSMRAGGANVQLIFENHPGGGGGGGGGGEFRFPGNLGDYF
LGPGLEQLIQQLAENDPNRYGTPPAAKSAVAGLPDIKITGDLLDSDSSQCAVCKDTFELG
EEGKQMPCKHIYHKDCIMPWLELHNSCPVCRYELPTDDADYENRKTSQQQTGNTSNSNAN
NTNAGVMFGGLEGVGDQENSQTPRAGERRLRIPLQWLFRGLGSPAETSNSGGANNDNNNG
NNNNTSNNAPREDSNPGSGGQARQEDLD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggccggagaagttggtggcgccgccgggaatcgaccgcagaattaccactgt
tatcaatgtgaacagacggttacgattacgacgttgccgaattcggagctttgttgtccg
aattgtaatggtacgtttctagaagaatcggaaaccgctacggtttctaacactaatgtt
ggtaatcatccgtttttctccgccgctactactgatgacctgcctttcggcgtcggcggt
ggaggtggcggtggtttcccgattgttttttcttcgactgggaatacaggttccggtggt
tctgttggttttgatgatctttctgcgctgtttggtggcatggctggtggtggttcgggt
gcttttaccggtagaggatcgaatcaatttgacccgtttgcttttctgaataactatttt
aattctatgagggcgggtggtgctaatgttcagttaatttttgagaatcatccgggagga
ggtggaggaggaggcggtggtggtgaatttaggtttccgggaaatttaggtgattatttt
ctcgggccagggcttgagcaattgattcaacagctagcggaaaatgatccgaatcgttat
ggtacacctccggctgcgaaatcggctgttgctgggctgcctgatattaagatcactggg
gatttgttggattccgattcatctcaatgtgcagtttgtaaagatacttttgaactcggg
gaggaagggaaacagatgccttgcaaacatatataccataaggattgtataatgccatgg
ctggagttgcacaattcgtgcccagtttgtcgttatgagctgcctaccgatgatgctgat
tacgagaataggaaaacatcacagcaacagactggcaatacgagtaatagtaatgccaat
aacactaatgctggtgtgatgtttgggggtttagaaggtgtgggagatcaggagaattct
cagacacctcgtgcaggggagaggaggcttaggataccgttacaatggcttttcagggga
cttggatcacctgccgagacgagcaacagtggaggagccaacaatgataataacaatgga
aacaacaacaatacgagcaacaatgctcctcgtgaggattctaatccaggttctggaggg
caagcgaggcaggaggatcttgattga
DBGET
integrated database retrieval system
