KEGG   Capsicum annuum (peppers): 107862831
Entry
107862831         CDS       T04646                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
cann  Capsicum annuum (peppers)
Pathway
cann04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cann00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    107862831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cann04131]
    107862831
Membrane trafficking [BR:cann04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    107862831
SSDB
Motif
Pfam: Beta-prop_VPS8 TPR_Vps8 VPS8_N Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_HPS5 WD40_Gbeta WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_Aladin Acetyltransf_19 EIF3I
Other DBs
NCBI-GeneID: 107862831
NCBI-ProteinID: XP_047264667
LinkDB
Position
3:239836541..239840662
AA seq 630 aa
MHLEEGASAQPMRLDGVHRSSNVLGYFDVDDNNTITQTLLSQAFRHKHGSSQVLAVHLNY
IAVGMSKGSILVMPSRYSPHHADNMDAKMLIFGSPGDRSHVPVTCLSFNLQGDMLFAGYG
DGHYTVWDVQKASVLKVVTEHKAPVVHLLYLGQDSQVTRQFFTVLSGDTKGVVNLDRFAV
YSLFKTISLSKSQELLNESNSTTLCAVPLISGESYGGATVASQEGGGPSLIEEGVVILGT
HQSALVAKFSPTFKVYAKIPRPDGVREGSMPYAAWKCMESHISFSFAESMSTETLEKVSL
LAIAWDRRVQVAKLVKSELKVCWRWTTDSSAVGLAWLDEQILVIFTATGQLCLFSKDGNL
IHQRSFAMDGSCGEDLMSYHSYFSNVFGNPEKAHHNCVGVRGATLYILRPSQLVVSRLLS
WKERIEVLHKAGDWMSALNMAMSLYDGQAHAVIDLPKNLDDAQKTLMPYLVQLLFSYVDE
VFSYIAVTSGNQLGPSGQSNELKYDGNFVNPDIKEQYTLVGGVSVEFCLHIKRLDVLFDE
IFPKYVAVNHKDTFLELLEPYILKDMLGSLPPEIMQALVEHYSTKGWLRRVEQCVLHMDM
LSLDFNQVLLHVLYVKIYDYCFTATPEGSH
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgcacttggaagagggtgcttctgctcaaccaatgaggcttgatggagttcataggagt
tctaatgtcttgggttactttgatgtagatgacaacaataccatcacccaaaccctttta
tctcaagctttcaggcataagcatggatcttcacaggtcctcgcagttcacctcaattac
attgctgtggggatgtccaaaggatcaattcttgtgatgccaagcagatactctccacat
catgctgataacatggatgctaagatgttgatatttggatcaccaggagatagatctcat
gtccctgtaacttgcttgagctttaatctgcaaggggatatgctctttgcaggatatggg
gatgggcattatactgtatgggatgtgcaaaaggcctctgtgcttaaagttgtcactgaa
cataaagctccagttgtgcatcttttatatttagggcaagattctcaagttactcgacag
ttttttactgtgctaagtggtgatactaaaggtgtagttaacttagaccggtttgcagtg
tattccttgttcaaaacaatctccctttcaaagtcccaggaactgctaaatgaaagcaac
agcactacattatgtgctgtgccactaatatctggtgaaagttatggaggtgctacagtg
gcttctcaagagggaggcggcccttctttgattgaggaaggtgtggtcatacttggcact
caccaatctgctctagtggcaaaatttagccccacatttaaagtttatgctaaaattcca
cgtcctgatggtgttagggagggttcaatgccctatgctgcttggaaatgtatggaatca
catatttctttcagttttgcagaaagtatgtccactgaaacattagaaaaagtttctctg
cttgctattgcttgggatcgaagagttcaagttgcaaagctggtgaaatctgagctaaaa
gtttgttggagatggactacggatagctcagcagttgggctggcatggttggatgaacag
attttggtaattttcacagcaactggacagctttgtttgttttcgaaagatgggaatttg
atccaccagagaagtttcgccatggatggatcttgtggagaggatctcatgtcataccat
tcctacttcagcaatgtctttggaaatcctgagaaagctcatcacaactgtgtaggtgtt
aggggggcaactttgtacatacttcggccatcccagcttgttgtttcacgccttctttcc
tggaaggaacgaatagaagttttacataaagcaggtgactggatgagtgcactgaacatg
gcaatgtctctttatgatggtcaggcacatgcagtcattgaccttccaaagaacttggat
gatgcgcagaagactcttatgccatatcttgtacaactgctgttttcatatgtagatgag
gtattctcctacatagcagtgacatctggcaaccaacttgggccgtcaggccaatcgaat
gaattgaagtatgatggtaactttgtgaatcctgatattaaggagcagtacactctggtt
ggtggtgtttccgttgaattctgtcttcatatcaagagacttgatgttctctttgatgaa
atttttccaaagtatgttgctgtgaatcacaaggatacatttttggagcttctggagcca
tatatattgaaagacatgctaggatctttaccacctgagataatgcaagcactagtggag
cactatagcactaaaggttggttacggcgcgttgaacagtgtgttctccacatggacatg
ttatccctggatttcaatcaggtattgctgcacgttttatatgttaaaatttatgattac
tgttttacggccacacctgaaggttctcattaa

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