Capsicum annuum (peppers): 107862839
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Entry
107862839 CDS
T04646
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cann03000
]
107862839
Transcription factors [BR:
cann03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107862839
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_4
Porin_3
zf-MYST
zf-met
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
107862839
NCBI-ProteinID:
XP_016564015
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Position
3:238731957..238734942
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AA seq
435 aa
AA seq
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MLSNNNPSSSSDPFNSSENANNASRRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICN
QGFQRDQNLQMHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKH
FRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACS
MGRLRSESQSLHPPCLSRTASSTPSPSSDTNLSTTPWSSTLLKKLSSAAATHQANPNIMK
SCTKQHNLELQLLTATTSSTSPAFDVSVSSKPNEDHSTYNLQLSIGSSDFNESSENANEK
RSSDTLRLKDEATEQLRLAMKEKVYAEEARQQAKRQIELAEQEFANAKRIRQQAQAELDK
ANALKEHAIKQISSTLSQITCHSCKQKFQSSTPRVNIIDENNSLALSYISSGLTEGHHEV
AKNINQTEHLKLSQR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcaataacaacccctcttcttcgtccgacccgtttaattcctcagaaaatgca
aataatgctagtagaagaaaaagaaggccagcagggaccccagatccggatgctgaagtg
gtatcactctcaccgaagacgttattagagtcggatcgatacgtatgcgagatctgtaac
caaggatttcaaagggaccagaacttacagatgcatagaaggcggcataaggtaccatgg
aagttgctcaaaagagaaaccccaattgtgagaaaacgtgttttcgtttgccctgagcct
acttgtctccaccatgatccttgtcacgccttgggagatctcgtaggcattaaaaagcac
ttccgtaggaaacacagcaatcataagcaatgggtgtgtgagaaatgctccaaaggctat
gcagttcagtctgactacaaagctcatcttaaaacttgtggtactcgtggccattcttgt
gattgtggccgcgttttttcaagggtggaaagtttcatcgagcatcaagatgcttgtagc
atgggcaggctccgatctgaatcacaatctttacatcctccttgcctttctcgcacagct
tcgagtactcctagcccatcaagcgacacgaatctcagcacaacgccatggtccagtacg
ttactaaaaaaattgtcgtccgcggctgctactcatcaggctaatcccaacatcatgaaa
agttgtacaaagcaacacaatttggagctacaactcttgactgctactacatcatcaact
agcccggcctttgatgtctccgtatcatctaaaccgaacgaagatcactcgacttacaac
ctccaactctccattggctcctcagatttcaacgagtcatcagagaacgcgaatgagaag
cgtagttcagacactttgaggcttaaagatgaagcaacggagcagctaaggctggccatg
aaagaaaaggtgtatgccgaagaagcaaggcagcaagcgaagaggcagatcgagttggct
gagcaggagttcgccaatgccaagaggattaggcaacaggcacaagcggagttggacaag
gctaatgcattgaaagaacatgccatcaagcaaatcagctccactctttcgcaaatcact
tgtcattcttgcaaacagaaattccaatcgtcaactccaagagtcaatattatagatgag
aataactcattggcattgagttatatctcttcgggtttaacagaaggtcatcatgaagtt
gccaagaatatcaaccaaaccgaacatctcaaactttctcaacgttag
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