Capsicum annuum (peppers): 107862890
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Entry
107862890 CDS
T04646
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1 isoform X1
KO
K14848
ribosome assembly protein RRB1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107862890
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107862890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Neuregulin
Motif
Other DBs
NCBI-GeneID:
107862890
NCBI-ProteinID:
XP_016564079
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All DBs
Position
3:complement(236336104..236350382)
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AA seq
474 aa
AA seq
DB search
MVRSLKNPKKAKRKNKQGAKKGEGSSSSDSVPSLPAKVWQPGVDKLEEGEELQCDASAYN
SLHAFHIGWPCLSFDVLRDSLGLVRTDFPHTVYCVAGTQAEKSSWNSIGIFKLSNISGKR
RDLVPDKIGDENADMGSNSSDSDEEEEEAGQVTPVLQLHKVFHEGCVNRIRAMTQNPHIV
ASWGDTGHVQVWDFSSHINALAESRSDLSHGASAVSNQAPLFKFGGHKDEGYAIDWSPLA
PGKLVSGDCKNCIHLWEPTSGATWDVCAKSFIGHTASVEDLQWSPTEPSVFASCSVDGNI
VIWDTNMKNPLAATIKAHKADVNVISWNRLASCMLASGSDDGTFSIRDLRMLKEGDSVVA
HFEYHKHPITSIEWSPHEASTVAVSSSDNQLTIWDLSLERDEEEEAEFKAKMKEHVNAPT
DLPPQLLFVHQGQKDLKEVHWHSQIPGMVVSTAADGFNILMPSNIENVVPANVA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggttcggagcttaaagaaccctaaaaaagctaaaaggaagaacaagcagggtgcaaag
aaaggagaaggatcgtcatcgtcggattcagtaccatcattgccagcaaaggtatggcaa
ccaggtgtagataaattagaggaaggggaagagcttcagtgtgacgcttctgcttataat
tctcttcatgccttccatattggctggccctgcttgagttttgatgtgctgcgtgactca
ctcggcttggtgcgcactgattttccacatactgtatactgtgtagcaggaacacaggca
gagaaaagttcttggaactcgattggtatatttaagttatctaatatatctggaaaaagg
cgggatttggtgccagacaagataggtgatgagaacgctgatatgggcagcaacagcagt
gacagtgatgaagaagaagaggaagctggacaggtgacacctgtgttacagttacacaag
gtgtttcatgaagggtgtgttaatcgcatacgtgctatgacgcaaaacccccatatagtc
gcttcttggggtgataccggtcatgttcaggtttgggattttagctcgcatataaatgct
ttggcagaatcacggagtgatcttagccatggggcttctgcagtctctaatcaagcaccg
ttatttaaatttggtggacataaagatgaaggctatgctatagactggagtcctcttgct
cctgggaagcttgtgtcaggtgactgcaagaattgtatccatttgtgggagccaacatct
ggtgcaacatgggatgtttgtgctaaatcttttattggacacactgcaagtgttgaagat
ctccagtggagcccgacagaaccttctgtatttgcttcttgctcggttgatggaaatatt
gtaatatgggacaccaatatgaaaaaccctcttgctgcaactataaaggcacataaggca
gatgtcaatgtgatatcatggaacaggttggcgagctgtatgcttgcatctggaagtgat
gatggaacattttctattcgagatcttagaatgctcaaggaaggagactctgtagtggca
cactttgaatatcacaaacatcccatcacttctattgaatggagtccccatgaagcctca
acagtggctgtttcatcatcagataaccaactaacaatctgggatctttctttggagaga
gatgaggaagaggaggcggagttcaaagctaaaatgaaagagcatgtcaatgccccaaca
gatttgcccccacaacttctcttcgttcatcagggtcagaaagatttgaaagaagttcat
tggcattcccagatcccaggaatggttgtatccactgcagcagatggatttaacatactg
atgccatcaaacattgaaaatgtggttcctgcaaatgttgcatga
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