Capsicum annuum (peppers): 107862923 Help Entry 107862923         CDS       T04646                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism cann  Capsicum annuum (peppers) Pathway cann03040   Spliceosome Brite KEGG Orthology (KO) [BR:cann00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107862923  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cann03019]     107862923    03041 Spliceosome [BR:cann03041]     107862923 Messenger RNA biogenesis [BR:cann03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      107862923 Spliceosome [BR:cann03041]  Complex B   Other components    Prp19-related factors     107862923  Complex C     107862923 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 ARM_TT21_C NRDE-2 ARM_TT21 TPR_19 Motif Other DBs NCBI-GeneID:  107862923 NCBI-ProteinID:  XP_016564124 UniProt:  A0A1U8G7X9 LinkDB All DBs Position 3:complement(235098770..235108176) Genome browser AA seq 915 aa AA seqDB search MSIPKELYPSQEDLPYEEEILRNPFNLKLWWRYLVAKADSPFKKRAMLYERALKALPGSY KLWHAYLRERVELVRNLPINHSQYQTLNNTFERALVTMHKMPRIWIMYLLSLTEQKLVTR TRRTFDRALCALPVTQHDRIWEHYLVFVSQRGIPIETSLRVYRRYLKYDPSHIEDLLEFL LNSELWQEAAERLAGVLNDDKFYSIKGKTKHRLWLELCDLLTQHAAEISGLNVDAIIRGG IKKFTDEVGRLWTSLADYYIRRKLVEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESML ALKMEEMSDSEVEDEGSNGEVGAEEDVDEEDDRLNVAKLEKKLKAFWLNDDKDVDLRLAR LEHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPVKAVGK PHTLWVAFAKLYENHKDVANARVIFDKAVQVNYKTVDHLASVWCEWAEMELRHRNFKGAL ELMRRATAEPTVEVKRRVAADGNEPVQIKLHKSLRLWLLYVDLEESLGSLESTREVYERI LDLRIATPQIIINYAVLLEDHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK SKLERARELFEHAVEEAPADAVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPANEKLS MYEIYIARAAEIFGVPRTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRSRALYK HSSQFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQND QLQTLEEAKDVLKKAGVADDEMAALERQLVPPENDTKGKEQSRVVGFVSAGVVESNGQKN TANNEDIELPEESDSEEEDGKIEIAQKDVPDAVFGGLIRKREEGAEVENDSTATNKENDG PLGALERIKRRKQGS NT seq 2748 nt NT seq  +upstreamnt  +downstreamnt atgtcaatcccaaaggagctctacccgagccaagaagaccttccatacgaagaagaaatc ctcagaaatccattcaacctaaagctatggtggcgttatttagtagcaaaagcagattct ccattcaaaaaacgagcaatgctatacgagcgagcactaaaagctcttccaggtagctat aaattatggcacgcatatctccgtgaacgtgtcgaattagttcgaaaccttccgattaat cactcacagtatcaaactttaaacaacactttcgagagagcgcttgttacaatgcataaa atgccgaggatttggattatgtatttgttgagtttaactgagcagaagctagtaacgaga acgcggaggacttttgatagagcgttatgtgcattgcctgttactcagcatgataggatt tgggagcattatttggtttttgttagtcaaaggggaattcctattgagacatcgcttagg gtttataggaggtatttgaagtatgatccttcacatattgaggatttgcttgagtttttg ttgaattcagagttgtggcaggaggcggcggagaggttagctggtgtgttgaatgatgat aagttttattcgattaaagggaagactaaacataggctgtggttggagttatgtgatttg ttaacacaacatgctgctgaaatatcggggttgaatgtggatgcgataattagaggaggg attaagaagttcacggatgaggttgggaggctttggacgtcgttggctgattattacatt aggaggaagttggttgagaaggcgagggatattttcgaagaagggatgacaactgtggtg actgttagggattttagtgttatctttgatgcgtattctcagtttgaggagagtatgctt gcattgaaaatggaggagatgagtgatagtgaggtggaggatgaagggagtaatggtgag gtaggggcggaggaagatgtggatgaggaggatgataggttgaatgtggcaaaattggag aagaagcttaaagcgttttggttaaatgatgataaagatgttgacttgagattagcgagg ctagaacatcttatggataggaggccagagctcgcgaatagtgtccttttgaggcaaaat ccgcataatgtagaacaatggcatagaagggtaaaacttttcgaagggaatccgacaaag caaatattaacatacactgaggcagttagaactattgacccagttaaggctgtggggaag ccacatactttgtgggttgcatttgcaaaactttatgaaaaccataaggatgttgcaaat gcaagagtcatctttgataaggcagtgcaggtgaactacaaaactgttgatcatctggcc agtgtttggtgtgaatgggctgagatggaactacggcacaggaatttcaagggtgctctg gaactgatgaggcgtgccactgctgaaccaactgttgaggttaaacggagagttgctgct gatggaaatgaaccagtgcaaattaagctacacaaatctctaaggctttggttactgtat gtggatttggaggagagtctaggaagcttagagtcaactcgtgaggtctatgagcgaatt ttggatctgagaattgctacaccacagatcataataaattatgcagtacttctggaggat cacaagtactttgaggatgcattcaaggtctatgagaggggcgttaagatatttaaatat ccacatgtaaaggatatatgggttacatatctttccaaatttgtgaagagatatggaaag tcaaagttggaacgagctagagagttatttgagcatgccgtggaagaggcccctgctgat gctgtgaagccattgtatcttcaatatgctaaattagaggaagactatggtcttgcgaag cgggctatgagggtttatgatcaagctacaaaagctgttccagcaaatgagaaattgagc atgtacgagatctacatagctcgtgcagctgagatatttggtgttccaagaacaagggag atatatgaacaagcaattgagtctgggcttccagacaaggacgtgaaagttatgtgctta aagtatgctgaacttgagaagagcttaggagagattgatcgttcccgtgcactatacaag cactcatcacaattcgcagaccctagatctgaccctgatttctggaacaagtggcatgag tttgaggtgcagcatggaaacgaggataccttccgtgagatgctccgtgtaaagaggagt gtatctgcaagctacagccagacacattttatcctaccagagtatctcatgcaaaatgat cagttgcagacccttgaggaagcaaaggatgtattgaaaaaagctggtgttgctgatgat gagatggcagctcttgagaggcagttagtgccccctgaaaatgatacaaaaggcaaagaa cagagtcgggtagttggatttgtaagtgcaggagtagttgagtcaaatggacagaaaaac acagcaaacaatgaggatattgagctacccgaggaaagtgattctgaagaggaggatggg aaaattgagattgcgcagaaggatgtccctgatgcagtgtttggaggtcttatccgtaag agggaagaaggtgctgaagtagagaacgactctactgccacgaataaagagaatgatggc cctcttggcgcgctagaaagaataaaacgaaggaaacaagggtcttaa

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