Capsicum annuum (peppers): 107863094
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Entry
107863094 CDS
T04646
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107863094
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107863094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-GeneID:
107863094
NCBI-ProteinID:
XP_016564349
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All DBs
Position
3:complement(230729779..230735551)
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AA seq
674 aa
AA seq
DB search
MDRSRSKRYYYDQDYESDNLPRTRQRYNPNPHGNHHYPPPPTHRRPVAGGGGGGRKMQDP
SLMVTTSYRILCYDVKAGGVIGKSGSIIKAIRQHTGAWVNMHELIPGDDERIIEISDTRR
RDPDGRMPAFSPAQEALLLIHERILDSDGGGGGGGGYSGGMEMEEEFRMRGVSGNNRAVT
RLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRILPRDHTLPRCVSMSEEIVQVVGETIAV
KKAVEIISSRLRESQHRDRGHFPGRPHSPERFVPPDDEFIPHMNNTARRMSENGSTFGSR
MPAGMNSGRSNNFSSSSSGYAIESGIAPTNDNGQIMYVEDLVFRILCPIDRVDTVAGESD
GIIDLLQNEIGVDVKILNPIASSDEQVIIISSDEGPDDELFPAQEALLHIQTRIVDLLPE
KGYIITTRLVVQTDEVECLGGRDAPLSDMKLAGATVKILPKEELPPCLSSTDEIVQIDGE
ITAAREALVEVTSRLRSYTYREFFQKDIPSPAIPASSPTKSTVGADKNSFNNTSPSQQNY
GVNDVPSSIFQNAPPKPMAQPVKETGASAGEIAKQNESERREDTPSGLNRMHVTLVTRST
LEVVIPPHAAPKLITKSRNKLAQISELSGANVNLIEDRPEVTEKIIQISGTPEQAERAQS
LLQGFILSTLEDGP
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggacagatcaagatctaagaggtactattatgaccaggattatgaatcggacaactta
cccagaactagacagaggtataaccctaaccctcatgggaatcatcattatccgccgccg
ccgactcaccgccgtccggttgctggaggaggtggaggagggcggaaaatgcaggacccg
tcactgatggtgactactagttataggattctgtgttacgatgttaaggcgggtggagtg
atagggaaatccgggagtataattaaggctattagacagcataccggggcatgggtgaac
atgcatgaactgattccgggtgatgatgagcgaataatagagatttcggatacgcggcgg
agggatccggatggtagaatgcctgcattttcgcctgctcaggaggcgctgttactgata
cacgagagaattttggatagtgatggtggtggtggtggaggaggagggtatagtggtggg
atggaaatggaagaggagtttaggatgagaggtgttagtgggaataatagggctgtgacg
aggttggtggtgtctagaatgcatgtgggatgtttgctagggaaaggagggaaaattatt
gagcaaatgaggatggagactaagacacatattagaattttgcccagagatcacactttg
ccccgttgcgtttcaatgtcagaggagattgttcaggttgttggggaaacaattgcagtg
aaaaaggctgtggaaattatttcctcacgcttgagggagagccagcatcgtgatcgtggt
cactttcctggtcggccacattcacctgagcggttcgtccctcctgacgacgaatttatt
ccccacatgaacaatacagctcgcaggatgtctgaaaatgggtcaacgtttggatcaagg
atgcctgctggtatgaacagtggtcgaagcaacaacttttcttcatcctcatctggatat
gccattgagtctggaatcgctcccaccaatgataatgggcagatcatgtatgttgaggat
cttgtgtttcgaattctctgtccaattgacagggtcgatactgttgctggggaatcagat
ggaattatagatttgcttcaaaatgagattggtgtggatgtcaagattttgaatcccatt
gctagctcagacgaacaggtcataatcatttcttctgatgagggtccagatgatgagctg
tttcctgctcaggaagctcttttgcatattcaaacccgcattgttgatctccttccagag
aagggatatattattacaactcgtttagttgtgcaaacagatgaagttgaatgtttggga
ggaagagatgcaccattatctgacatgaaattagctggtgctactgtcaagattctacca
aaggaagaacttccaccgtgtctgtcaagtactgatgaaattgtacagattgatggagag
atcacagcagctagagaagctcttgttgaagtgacatcgagacttcgaagttatacttac
cgggagttctttcagaaggatataccctcgccagcaatacctgcttcaagcccaactaag
agtactgttggagcagacaaaaattctttcaataacacatctccttctcaacaaaactac
ggtgtgaatgatgttccatcttcaatctttcaaaatgcaccacccaaacccatggcacag
ccagttaaagaaactggggcatctgccggtgaaatagccaagcaaaatgaaagtgagcgt
cgcgaagatactccgagtggattgaatagaatgcatgtaacattggtcactagaagtaca
ttggaagttgtcatacctccacatgcagcgcccaaactgataacaaaatcaagaaataag
ctagctcagattagtgagttatcaggagcaaatgttaatttgattgaggataggcccgag
gtgacggagaagatcatacaaatatcaggcactccggagcaagcagagagagctcaaagt
ctgcttcaagggtttattttaagcaccctcgaagatggcccttga
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