Capsicum annuum (peppers): 107863148
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Entry
107863148 CDS
T04646
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107863148
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107863148
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_occluded
DUF4523
Motif
Other DBs
NCBI-GeneID:
107863148
NCBI-ProteinID:
XP_016564436
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All DBs
Position
3:complement(227032516..227040525)
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AA seq
445 aa
AA seq
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MASASSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGRVVNTKCNVGANRNQAFI
EFAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFTDAETATSAKDALDGRSIPSYL
IPELGPCSLKITYSAHTDLSVKFQSHRSRDYTNSLLPVASSAIDASGQFSLGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHTVFSAFGPVLKIAMFDKNGGLQALIQYPDVRTAAAAKE
ALEGHSIYQGGYCMLHISYSRHTDLSIKINNDRGRDYTMPITPMLNSQPSVLGQQPPLIG
GPGVHPYGAPSQYTPAAGVAPPQHPAVWNTAPATATPSMPMQMHSHPYMPPASVPSQMGS
GVMPMHGQNVIPQSTPMPPYPPQYH
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcttctagccagcctcagtttcgatacacacagcccccatcaaaggttctc
catttgagaaacttaccatgggagtgcacagaggaggagctgatcgaattgggaaaacct
tttggtagagttgtgaataccaagtgtaatgtaggagcaaaccgaaatcaagcatttata
gagttcgcagaattaaatcaagctattgcaatgatatcgtactatgcctcttcctctgag
ccagctcaggtacgggggaaaaccgtctacctacaatattcaaataggcaagagatagtg
aacaacaaaactacagcagatgtagccggaaatgtactgttggttacaattgaagggaat
gatgctcgccttgtcagcattgatgttttacacttggtattttctgcttttgggttcgtg
cacaagataacaacatttgagaagactgcaggattccaggctctggtgcaatttactgat
gcagaaactgctacttcagcaaaggatgccctggatggaagaagcattcccagctacttg
attccggaactgggaccatgtagccttaaaatcacatattctgcccatacagatctgagt
gtgaagtttcagagtcatcgtagcagggactataccaattctctccttcctgtcgcttcc
tcagccatagatgcaagtggtcagttcagtttgggtttggatgggaagaaattggaacct
gagagtaatgttcttcttgcttccattgagaacatgcagtatgcagttaccttggatgtc
ctacacacggttttctcagcttttggtcctgtactgaagattgctatgtttgataagaat
ggagggcttcaggctctgatacaatatccagatgtgcgcacagctgctgctgcgaaggaa
gctttggaaggacattccatatatcaaggtggatattgcatgcttcacatctcttactct
cgacacactgatcttagtataaagattaataatgatcgcggcagagattacacaatgcca
attactccaatgttgaattctcaaccttcagtcttggggcagcagccgcctctgatagga
ggtccaggtgttcatccatatggtgccccttcgcagtacactccagctgcaggtgtagct
ccgccccagcatcctgccgtctggaacacggcgcccgccactgcaactccatcaatgccg
atgcagatgcatagtcacccttacatgccacctgctagtgtgccttctcagatgggttcc
ggtgtgatgccaatgcatggacagaatgtcataccacaatctactccgatgcctccttat
cctccacagtatcactag
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