Capsicum annuum (peppers): 107863162
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Entry
107863162 CDS
T04646
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107863162
Transcription machinery [BR:
cann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107863162
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
107863162
NCBI-ProteinID:
XP_016564454
UniProt:
A0A1U8G8V2
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Position
3:226850094..226855785
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AA seq
516 aa
AA seq
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MGVVTVSSSASRSPLGLSTRFAARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETS
KENEKRSRRVSKRPERVHAVSMEAFPSTSELDYSEAAAKLESIYKRSLETASSNTEVKDR
LVKRRPRTRKRIVEGDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSER
RKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAVLQV
KENLQSDLGREPTDGEVADATSMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQD
FANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPFG
LESIRVEIQKAKLELLFELQRVPTEEEIIETVGLSPERYHEVMKVSKPVSSLHARNMTTQ
EELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctctgcttctcgaagtccattgggattgagcacaagg
tttgcagctcgtttatgtccgcttaaaaggccagtaattgtatcgtttaagaaagataaa
acaaagaatacaactttagttgcacctaaggaatccatatccttgcctatagaaacgtct
aaagaaaatgaaaagaggtcaagacgagtatctaaacgtcccgagagagttcatgctgtt
tcaatggaagcctttccgagcacgtcagaattagattacagtgaagctgctgccaaactt
gaaagtatctacaagcgcagtctggaaactgctagctccaataccgaagttaaggatcgt
ttggtgaagagaaggccaaggacgaggaagaggattgtagaaggtgatgaggaagcaaag
agagaggttgctaataatgtggtcaagaatcgtagaaagaagtctaagaggttgaatctt
gaccagaggattgctctactaaagaataaagatggtgaaatggttacgtcatccgaaaga
agaaaactcaaagaggacactgaagatgaaaaaatcgataagcttgtcagagaatattca
ggtgctactgacttagcgagcttagactggaagaaaatgaagatccctccagtgcttcca
tcatctgagcatgcatggctcttcaagttgatgcaacctatgaaggccgtccttcaagtt
aaggaaaacttgcaaagtgatttggggcgagaaccaactgatggtgaagtggctgatgca
acaagtatggatgcttctgaactacggaaaaagctggaagttggccgagctgctagaaat
aagctgattaagcacaatctacgtcttgttttgtttgtgatgaacaaatattttcaagac
tttgcaaatggttcaagattccaagacctctgtcaggcaggcgtcaaaggtctaatcaca
gctattgaccgttttgagcctaataggaaatttaggctatcaacatatggtcttttttgg
attagacatgccataatacgttctatgacaacctcaagcttcaccaaagttccattcggg
cttgaatctatcagagtggaaatccagaaggccaaattggagttgctgtttgagcttcag
agggtaccaacagaggaagaaataattgaaacagttggactttcccctgagagataccat
gaagtgatgaaagtatctaaacctgtttcctctctacatgcaagaaacatgacaacccaa
gaagaactcatcaatggaataactgatgtagatggcgttgatggggataagaggaagcag
cctgctctactcaggcttgctcttgatgatgtgcttgattctcttaagcccaaggagagt
ctagtaatcagacaaagatatggacttgatggcaaaggtgatagaacattgggagaaatt
gcaggcaacctaaatatttcgagagagatggtacggaagcatgaagtgaaggctctcatg
aagctcaagcatccaactcgagtggattatcttcgccggtacatattctaa
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