Capsicum annuum (peppers): 107863394
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Entry
107863394 CDS
T04646
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107863394
03036 Chromosome and associated proteins [BR:
cann03036
]
107863394
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107863394
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Helicases
107863394
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107863394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
FlpD
Cas3-like_C_2
DUF5918
Motif
Other DBs
NCBI-GeneID:
107863394
NCBI-ProteinID:
XP_016564774
LinkDB
All DBs
Position
3:187983208..187988279
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AA seq
665 aa
AA seq
DB search
MPALVVSEIMTSEDSKELKKKMKIDSRSDSDEVKKKDKKRKALNLYDDNEENGSLKQSKL
NDDEKKKKKKKKKKKEEEEEEELVEDKEEDPNALSNFRISVPLREALVAKGINALFPIQA
LTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGPTKVSRKTGYGRAPSVLLLLPTR
ELALQVFADFEVYGGAVGITSCCLYGNSPMGQQEVQLKRGVDIVVGTPGRVKDHIERGNI
DFRSLQFRVLDEVDEMLKIGFVDDVEFILGKVEDASQVQTLLFSATLPSWVKHISSKFLK
PDKKTVDLVGDEKMKASKNVRHIIIPCTGSARSQLIPDILRCYSSGGRTIIFTETRGYAS
ELAGILPGARALHGEIQQSQREITLSGFRSGKFLTLVATNVAARGLDIDNVQLIIQCEPP
RDVEAYIHRSGRTGRAGNTGVAVMLYDPKKSNISKIERESGVKFEHLSAPQPADVAKAAG
KEAAEAVAEISDSVIPAFKAAAEELLHTSELSPAELLAKALAKAAGYSEIKSRSLLSSME
NCVTLLLECGRPIFSPSFAYNVLRGFLPEDKVELIKGLTLTADGKGAVFDVSSDELDTFL
AGKNAQGVSMEVVKELPRLQEKDQARGGRFGGSHGGFSDRRGGGRFSGGRGGRGGGRGYG
NFGRR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgttgtaagcgaaataatgacgtctgaagattcgaaggagctgaagaag
aagatgaagattgattctaggtctgattcagatgaggtgaagaagaaagataagaagcgt
aaagctttaaacttgtatgatgataatgaggagaatggaagtttgaaacagagtaaactg
aatgacgatgaaaagaagaagaagaagaagaagaagaagaagaaggaggaggaggaggag
gaggaattggtggaggacaaagaggaggatcctaatgcgttgtcgaattttaggatttca
gtgcccctaagagaagctttggttgctaaggggataaatgctctgtttcctattcaagct
ctgacttttgatactatcttggatggctctgacttggttggtcgagctcgtactggtcag
ggtaaaacattggcctttgtgttgcctatattggagtccctgataaatggacctactaaa
gtatcacggaaaacagggtatgggagagctccaagtgtcctactgcttttgcctactagg
gagttggcacttcaggtgtttgctgactttgaagtttatggtggggctgtggggataact
tcttgttgtttatatggaaattccccgatgggacaacaagaagttcaattgaaaagagga
gttgatatcgtcgtaggtactcctggaagagttaaggaccacatcgaaagaggaaatatt
gatttcaggtctttacagttccgtgttcttgatgaagttgatgaaatgttgaaaattggt
tttgttgatgatgttgaatttatattaggcaaggtagaggatgcaagccaagttcaaaca
cttcttttcagtgccactttgccaagctgggtgaagcatatatcttcaaagtttctcaaa
cctgataagaaaacagttgatcttgttggtgatgagaaaatgaaggccagtaagaatgtg
aggcatattattataccatgcactggttcagccagatctcagctgattcctgatatcctt
cgctgctacagcagtggtggacgcacaattattttcactgagacaaggggttatgcttcg
gagctagctggcatattgcctggggcacgtgctttgcatggagagattcaacagtcccag
cgtgagatcacactttctggattcagatcaggaaaattcttgacattagtggccacaaat
gtagcagcccgtggattggatatcgataatgtccagttaattattcagtgtgagccgcca
cgcgatgttgaagcgtatattcatcgctctggcaggacaggacgagcaggaaataccggt
gttgctgtaatgctttacgatcctaagaagtccaacatttctaagattgaaagagaatct
ggtgtcaagttcgagcatctatctgctccacagccagctgatgttgctaaagcggctggg
aaagaagcagcagaagcagttgctgaaatttctgatagtgtaatacctgctttcaaggct
gctgcagaggaacttctacatacctctgaactatcaccagctgaattgcttgcgaaggca
cttgccaaggcagctggctactctgagatcaaaagtcggtctctcctttcttccatggag
aactgtgttactctacttcttgagtgtgggaggcccatattttcaccttcctttgcgtat
aatgttttgcggggtttcctacctgaggacaaggttgaattaatcaaaggtcttactttg
acagctgatggaaagggcgcggtgtttgatgtatcttctgatgaactagatacatttcta
gcagggaagaacgcacaaggtgtaagcatggaggtagtaaaagaactacctcggttgcaa
gagaaagaccaggcgagaggtggaagatttggtgggagccatggtggcttctctgacagg
agaggtggaggtcgattttctggaggcagaggtggaagaggtggtgggagaggttacgga
aactttggccgtagatga
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