Capsicum annuum (peppers): 107863522
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Entry
107863522 CDS
T04646
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107863522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107863522
Spliceosome [BR:
cann03041
]
Complex A
Other components
Complex A specific factors
107863522
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RapA_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107863522
NCBI-ProteinID:
XP_016564945
UniProt:
A0A1U8G1F1
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Position
3:<183356517..183359813
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AA seq
820 aa
AA seq
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MMVGPTTRALSINTCLVSSILPNWYISICHALSFMDGQSPSVVSSEALASYHTGSCYNNY
FDAYSQSPSSNQNSQENHNHVQAPENSGPDQASEEQKIGESTLKLEIQRPLLSGNGLTKT
HSSNDRDQSGGEEETSSRRRRRSRWDPPPTEDGTAGTGGRKRKSRWSDDDPKPLTQLPDF
MKDFTGGIEFDPEIQALNSRLLEISRKLQSGMPLDDRPDGARSPSPEPIYDNMGVRVNTR
EYRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPSYNFIGLIIGP
RGNTQKRMEKETGAKIVIRGKGSIKEGRFQQKGNLKPDPSENEDLHVLVEADNQESLEAA
AAMVEKLLQPVDEVLNEHKRQQLKELAALNGTIRDEEFCRLCGEPGHRQYACPSRTTTFK
SEVLCKICGDGGHPTIDCPVKNTTGKKMDDEYQNFLAELGGTIPESLTKQNSATLALGVG
NSGSNPPWASSKNDGATSLPGLGSSVLKPKEFDETNLYIGYLPPTLEDDGLINLFSPFGT
IVMAKVIKDRLSGLSKGYGFVKFADVEQANTAITSMNGHRLEGRSIAVRVAGKPPQPTVP
PGPAPAIPSYLVPNQGMGAYPSQQYAAGGPIGNAPPGGYLPPGASVSWGPPVPPPYAQYP
PPSPGSAMYPPVPGQPIPPYGMQYPPPIPAASSGAPAQTVSSGEQSYTSAGEAQQSYPPG
VQSQNSAPAPSVPTYVYGNSVTPNAQPAYPTSSYSYPSYYGFTPPPPPPSASQSNGNHSQ
GMSNVPWTPNPPAHTPPSSAEKPAYGADAEYEKFMSEMKS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgatggttggtccgaccacacgagcactgtctataaatacgtgccttgtttcgtccatc
ctccctaattggtatatctcgatttgtcacgcactctctttcatggatggccaatctccc
tctgttgtttcctcagaagccctagcctcctatcatacaggttcatgctacaacaattac
ttcgatgcatattcccaaagcccttcgagcaatcaaaactctcaagaaaatcataaccat
gttcaggcgcctgaaaattctggtccagatcaagcatcagaggagcaaaaaattggcgaa
tctactctgaagctcgagatacagaggccgctgttgtccggaaatggattgacaaaaact
cacagcagcaacgatagggaccaatcaggcggtgaggaagaaaccagcagtagaaggaga
agaaggagccgttgggacccacctcctactgaagatgggaccgctgggactggtggaaga
aagaggaagtccaggtggtccgacgatgaccccaaacccctaactcaattgcctgatttc
atgaaagattttactggaggtattgagtttgatcctgaaatccaagctcttaatagtaga
ttacttgaaattagtaggaaattacaatccggtatgcccttggatgacagacctgatggt
gctcgatcgccttcccctgaacctatatatgataatatgggagttcgggttaacactagg
gagtaccgcgcccgagaaaaattgaatagggagagacaagagataatatcacaaatcatt
aagaaaaaccctgcttttaagcctcctgctgattataggcctcctaagcttcaaaagaag
ctctacattcccatgaaggagtaccctagttataattttattggactgatcattggtcca
agagggaatactcagaagaggatggaaaaggagacaggagcaaagattgtaattcgaggc
aaagggtcgatcaaggagggtaggttccagcaaaaggggaatttaaaacccgatccttca
gagaacgaagatttacatgtgttggtggaagctgacaatcaggagtcacttgaagctgct
gctgctatggtggagaagctcttgcagcctgttgatgaagtgctcaatgaacataagagg
caacagcttaaggaacttgctgcgttgaatggaactattagagatgaggagttttgtagg
ctatgtggtgaaccagggcataggcagtatgcatgtccttctcgcaccaccacctttaag
agtgaagttctctgtaaaatatgtggtgacggtggacatcccactatcgactgtccagtg
aaaaatactactggcaagaaaatggatgatgagtaccagaattttctggcagaattggga
ggtaccattcctgaatcattaacaaagcaaaactcggcaacgctagctcttggagtggga
aactcaggaagcaatcctccttgggcaagcagtaaaaatgatggtgccacttcacttcct
ggcttagggtcaagtgtactaaagccaaaggagtttgatgagacaaacttgtacattggt
tacttgccacctactcttgaagatgatggtttgatcaatttattttctccatttggtacc
attgtgatggctaaagttataaaggatcgtctcagtggtctgagtaaaggttacggattt
gttaagtttgcggatgttgaacaagctaatactgctataactagcatgaatggccaccgc
cttgaaggaagatcaatcgctgtgagagttgcaggtaagccgcctcagcctactgtgcct
ccaggacctgctccagcaataccttcatacctggttcctaatcagggcatgggcgcatat
ccgtcgcagcagtatgcagcgggtggtcctattggcaatgctccccccggtggctatctc
ccacctggtgcttcagtttcatggggaccacctgtgcctccaccatatgcccagtaccca
cctccttctcctggctcagccatgtatcctcctgtcccaggtcaacccatccctccatat
ggaatgcagtatcctcctccaattccagcagcatcttctggtgcccctgctcagactgtt
tcttccggtgaacaatcttatacatctgctggtgaggcacaacaaagctatcctcctgga
gtgcaatctcagaatagtgcacctgctccttcagttcctacttatgtgtatggcaattct
gtcacacctaatgctcaacctgcatacccaacatcttcatacagttatccatcttattat
ggtttcacaccaccacctcctcctccttctgcatcccagtccaatgggaaccattcacag
ggtatgagcaatgttccctggactccaaatccaccagctcacacacctccatcatctgca
gagaagcctgcttatggtgcggatgcagaatatgagaagttcatgtcagaaatgaagtca
tga
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