KEGG   Capsicum annuum (peppers): 107863524
Entry
107863524         CDS       T04646                                 
Name
(RefSeq) splicing factor-like protein 1
  KO
K13095  splicing factor 1
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107863524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107863524
Spliceosome [BR:cann03041]
 Complex A
  Other components
   Complex A specific factors
    107863524
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP RRM_1 KH_1 KH_12 eIF3g zf-CCHC RRM_5 PHD_4 KH_PNO1_2nd zf-CCHC_2 RapA_C
Other DBs
NCBI-GeneID: 107863524
NCBI-ProteinID: XP_016564947
UniProt: A0A1U8G0I8
LinkDB
Position
3:183113850..183120823
AA seq 731 aa
MMPNLRHQWSKNSEYLSENGLTNTHSSTDKDQSGGEEETISRKRRRSRWDPPPTESTNDD
GTRRKRKSRWSDDDPKPVIQLPDFMKNFTGGIEFDPEIQALNNRLHEISWKLQSGMPLDD
TPERARSPSPEPIYDNKGVRINTREYRAREKLNREKVEIITQIIKQNPNYKPPADYRPPK
LHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGKFQQKGNLK
PDPSENEDLHVFVEAENQESLEAAASMVEKLLHPVDEVLNEHKRQQLKELAALNGTIRDE
EICRLCGEPGHRQYACPSRTTTFKSEVICKICGDGGHPTIDCPAKSTTGKKMDDEYQNFL
AELGGTIPESLTKQNSGTLALSAGSSGSNPPWGSNNHAGGAGATSHSSLRSSVLKPREFD
EANLYIGYLPPTLDDDGLINLFSPFGSIEMAKVVKDRLSGLSKGYGFVKFVDVEQANSAI
TSMNGHRLEGRSIAVRVAGKPPQPTVPPGPALAIPSHPVSNQGMGAYPSQQYAAGGPIGN
APPGGYLPPGAPVPWGPPVLPPYAQYPPPPGSAMYPPVPGQPIPPYGMQYPPPIPAASSG
APGQTVSSGENHQSYISSGETQQSYPPGVQSQSSTPAHSVPTYVYGNSVTAMLPDTQPAC
PTSSYSYPSYYGAAPPPPPPSAFQSNGNHSQGMSNVPWAPNPPAHAPPSSAEKPAYGVDA
EYEKFMSVMES
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgatgcccaacctcaggcatcagtggagcaaaaattccgagtatttgtcggaaaacgga
ttgacaaatactcacagcagcaccgacaaggaccaatcaggcggtgaggaagaaaccatc
agtagaaagagacggaggagccgttgggacccgcctcccacggaatcaactaatgatgat
ggaaccagaagaaagaggaagtcgaggtggtccgatgatgaccccaaacccgtcattcaa
ttgcctgatttcatgaaaaatttcactggaggtattgagtttgatcctgaaatccaagct
cttaataatagattacatgaaattagttggaaattacaatccggtatgcccttggatgat
acacctgaacgtgctcgttcgccttcccctgaacctatatatgataataagggagttcgt
ataaacactagggagtatcgtgcccgagaaaaattgaatagggagaaagtagagattata
acacaaatcattaagcagaacccgaattataagcctcctgctgattataggcctcctaag
cttcacaagaagctctacatacccatgaaggagtaccctggttataatttcattggactg
attattggtccaagaggaaatactcagaagaggatggaaaaggagacaggagcaaagatt
gtaattcgaggcaaagggtcgatcaaggagggcaagttccagcaaaaggggaatttaaaa
cctgacccttcagagaacgaagatttacatgtgtttgtggaagctgagaaccaagagtca
cttgaagctgctgcttctatggtggagaagctcttgcatcctgttgatgaagtgctcaat
gaacataagaggcaacaacttaaggaacttgctgctttgaatggaacaattagagatgag
gagatttgtaggctatgtggtgaaccagggcataggcagtatgcatgtccttctcgcact
accacctttaagagtgaagttatctgtaaaatatgtggagacgggggacatcccactatt
gactgtccagcgaaaagtactactggaaagaaaatggatgatgagtaccagaattttctt
gcagagttgggaggtaccattccagaatcattaacaaagcaaaactcgggaacactagct
cttagcgcaggaagctcaggcagcaatcctccctggggaagcaataatcatgctggtggt
gctggtgccacttctcattctagcttacgttcaagtgtactgaagccaagggagtttgac
gaggcaaacttgtacatcggttacttgccacctactcttgatgatgatggtttgatcaat
ttattctctccatttggtagcattgagatggctaaagttgtaaaggatcgtctaagtggt
ctgagtaaaggatacggatttgttaagtttgtggatgttgaacaagctaatagtgctata
actagcatgaatggccaccgtcttgaaggaagatcaattgctgtgagagttgcaggtaag
ccgcctcagcctactgtgcctccaggacctgctctggcaataccttcacatccggtttct
aatcagggcatgggcgcatatccatcccagcagtatgcagctggtggtcccattggcaat
gctccccctggtggctatctcccacctggtgctccagttccatggggaccacctgtgctt
ccaccatatgcccagtacccacctcctcctggctcagccatgtatcctcctgtcccaggt
caacccattcctccatatggaatgcagtatcctcctccaattccagcagcatcttctggt
gcccctggtcagactgtttcttcaggtgaaaaccaccaaagttatatatcttctggtgag
actcagcaaagttatcctcctggagtgcaatctcagagtagcacacctgctcattcagtt
cctacttatgtgtatggaaattctgtcactgcaatgctacctgatactcaacctgcttgt
ccaacatcttcatacagctatccatcttattatggtgctgcaccaccacctcctcctcca
tccgcattccagtcaaatgggaaccattcacagggtatgagcaatgttccctgggctcct
aatccacccgctcatgcacctccatcatctgcggagaagcctgcttatggcgtggatgca
gaatatgagaagttcatgtcagtaatggagtcatga

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