Capsicum annuum (peppers): 107863524
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Entry
107863524 CDS
T04646
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107863524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107863524
Spliceosome [BR:
cann03041
]
Complex A
Other components
Complex A specific factors
107863524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
RRM_5
PHD_4
KH_PNO1_2nd
zf-CCHC_2
RapA_C
Motif
Other DBs
NCBI-GeneID:
107863524
NCBI-ProteinID:
XP_016564947
UniProt:
A0A1U8G0I8
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All DBs
Position
3:183113850..183120823
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AA seq
731 aa
AA seq
DB search
MMPNLRHQWSKNSEYLSENGLTNTHSSTDKDQSGGEEETISRKRRRSRWDPPPTESTNDD
GTRRKRKSRWSDDDPKPVIQLPDFMKNFTGGIEFDPEIQALNNRLHEISWKLQSGMPLDD
TPERARSPSPEPIYDNKGVRINTREYRAREKLNREKVEIITQIIKQNPNYKPPADYRPPK
LHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGKFQQKGNLK
PDPSENEDLHVFVEAENQESLEAAASMVEKLLHPVDEVLNEHKRQQLKELAALNGTIRDE
EICRLCGEPGHRQYACPSRTTTFKSEVICKICGDGGHPTIDCPAKSTTGKKMDDEYQNFL
AELGGTIPESLTKQNSGTLALSAGSSGSNPPWGSNNHAGGAGATSHSSLRSSVLKPREFD
EANLYIGYLPPTLDDDGLINLFSPFGSIEMAKVVKDRLSGLSKGYGFVKFVDVEQANSAI
TSMNGHRLEGRSIAVRVAGKPPQPTVPPGPALAIPSHPVSNQGMGAYPSQQYAAGGPIGN
APPGGYLPPGAPVPWGPPVLPPYAQYPPPPGSAMYPPVPGQPIPPYGMQYPPPIPAASSG
APGQTVSSGENHQSYISSGETQQSYPPGVQSQSSTPAHSVPTYVYGNSVTAMLPDTQPAC
PTSSYSYPSYYGAAPPPPPPSAFQSNGNHSQGMSNVPWAPNPPAHAPPSSAEKPAYGVDA
EYEKFMSVMES
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaacctcaggcatcagtggagcaaaaattccgagtatttgtcggaaaacgga
ttgacaaatactcacagcagcaccgacaaggaccaatcaggcggtgaggaagaaaccatc
agtagaaagagacggaggagccgttgggacccgcctcccacggaatcaactaatgatgat
ggaaccagaagaaagaggaagtcgaggtggtccgatgatgaccccaaacccgtcattcaa
ttgcctgatttcatgaaaaatttcactggaggtattgagtttgatcctgaaatccaagct
cttaataatagattacatgaaattagttggaaattacaatccggtatgcccttggatgat
acacctgaacgtgctcgttcgccttcccctgaacctatatatgataataagggagttcgt
ataaacactagggagtatcgtgcccgagaaaaattgaatagggagaaagtagagattata
acacaaatcattaagcagaacccgaattataagcctcctgctgattataggcctcctaag
cttcacaagaagctctacatacccatgaaggagtaccctggttataatttcattggactg
attattggtccaagaggaaatactcagaagaggatggaaaaggagacaggagcaaagatt
gtaattcgaggcaaagggtcgatcaaggagggcaagttccagcaaaaggggaatttaaaa
cctgacccttcagagaacgaagatttacatgtgtttgtggaagctgagaaccaagagtca
cttgaagctgctgcttctatggtggagaagctcttgcatcctgttgatgaagtgctcaat
gaacataagaggcaacaacttaaggaacttgctgctttgaatggaacaattagagatgag
gagatttgtaggctatgtggtgaaccagggcataggcagtatgcatgtccttctcgcact
accacctttaagagtgaagttatctgtaaaatatgtggagacgggggacatcccactatt
gactgtccagcgaaaagtactactggaaagaaaatggatgatgagtaccagaattttctt
gcagagttgggaggtaccattccagaatcattaacaaagcaaaactcgggaacactagct
cttagcgcaggaagctcaggcagcaatcctccctggggaagcaataatcatgctggtggt
gctggtgccacttctcattctagcttacgttcaagtgtactgaagccaagggagtttgac
gaggcaaacttgtacatcggttacttgccacctactcttgatgatgatggtttgatcaat
ttattctctccatttggtagcattgagatggctaaagttgtaaaggatcgtctaagtggt
ctgagtaaaggatacggatttgttaagtttgtggatgttgaacaagctaatagtgctata
actagcatgaatggccaccgtcttgaaggaagatcaattgctgtgagagttgcaggtaag
ccgcctcagcctactgtgcctccaggacctgctctggcaataccttcacatccggtttct
aatcagggcatgggcgcatatccatcccagcagtatgcagctggtggtcccattggcaat
gctccccctggtggctatctcccacctggtgctccagttccatggggaccacctgtgctt
ccaccatatgcccagtacccacctcctcctggctcagccatgtatcctcctgtcccaggt
caacccattcctccatatggaatgcagtatcctcctccaattccagcagcatcttctggt
gcccctggtcagactgtttcttcaggtgaaaaccaccaaagttatatatcttctggtgag
actcagcaaagttatcctcctggagtgcaatctcagagtagcacacctgctcattcagtt
cctacttatgtgtatggaaattctgtcactgcaatgctacctgatactcaacctgcttgt
ccaacatcttcatacagctatccatcttattatggtgctgcaccaccacctcctcctcca
tccgcattccagtcaaatgggaaccattcacagggtatgagcaatgttccctgggctcct
aatccacccgctcatgcacctccatcatctgcggagaagcctgcttatggcgtggatgca
gaatatgagaagttcatgtcagtaatggagtcatga
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