Capsicum annuum (peppers): 107863621
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Entry
107863621 CDS
T04646
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107863621
03041 Spliceosome [BR:
cann03041
]
107863621
03036 Chromosome and associated proteins [BR:
cann03036
]
107863621
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107863621
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107863621
mRNA cycle factors
Common to processing body (P body) and stress granule
107863621
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107863621
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107863621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107863621
NCBI-ProteinID:
XP_016565115
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All DBs
Position
3:complement(101823898..101832177)
Genome browser
AA seq
608 aa
AA seq
DB search
MRNSWADSVENVATDNVGPSGGTGASASTRRSSYVPPHLRNKPIAAEPLAPSQGGPPGND
RLGFNGPTSGSRWGGSRPDYGRQGGYSGGGRSGGGWGGRGGGWSREREVNPFGNDADVDL
EQSFEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEAVNLNIRRCKYVKPTPVQ
RYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGSFPQRPRGVRTVFPLALILSPT
RELSMQIHEEAKKFSYETGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAK
VSLQMIRYLALDEADRMLDMGFEPQIRRIVEQMDMPPPGERQTMLFSATFPKEIQRLASD
FLANYIFLAVGRVGSSTDLIVQRVEFVHDGDKRSHLMDLLHAQMANGVHGKHALTLVFVE
TKKGADALEHWLCINGFPATAIHGDRTQQEREQALRTFKRGDTPILVATDVAARGLDIPH
VSHVINFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNEGNLSMSKPLADLMQEANQEVPE
WLTRYASRSYGGRNRRAGGGRFGGRDFRRDSSYNRSGGGVNYYDGGNSSGGYGNYSGGYG
PGVTSAWD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaggaactcttgggcagattctgttgagaatgtagccactgataatgttgggcccagt
ggcgggactggagcttctgcttctacaaggagatcatcttatgtgccaccacatcttcgc
aacaaaccaattgcagccgagcctctagctccatcacagggtggccctcctggtaatgac
cgcttagggttcaatggaccaactagtgggtctcgatggggtggttctaggccagattac
ggacgtcaaggggggtatagtggtggtggccgcagcggaggtggttggggtggcagagga
ggtggttggagtagagaacgggaagttaaccctttcggtaatgatgcagatgtggacttg
gagcaatcgtttgagcaggagaatactggtataaattttgatgcttatgaggatattcca
gtagaaacaagtggagaaaatgtgccacctcctgttaatacatttgctgagatagattta
ggggaggctgttaacttgaatattaggaggtgcaagtatgttaagccaactcctgtccag
cgatatgcaattcccatctccttagcaggacgagatctcatggcctgtgcccagactgga
tccggcaagacagcggccttttgtttcccaattattagtggaatcatgagggggagtttt
ccgcaacggcctcgtggggtgcgtacagtgtttccccttgctcttattctctctccaaca
agagagctctcaatgcagatacacgaggaagctaaaaaattttcttatgagactggtgtt
agagtggtagtggcctatggtggagccccaatcaatcaacagctccgagagcttgagaga
ggagttgatattcttgtggcaactcctggaagactggttgatttacttgagagagcaaaa
gtttcattacagatgatcagatatttagcactcgatgaggcagatcgtatgctggacatg
ggattcgaacctcaaatcagaaggattgtggagcaaatggatatgcctccacctggtgaa
agacagactatgctgttcagtgctacattcccaaaggagattcagagactggcttctgat
tttcttgcaaactacatatttttggcggttggacgggttggttctagtactgatttgatt
gttcaacgagttgaatttgttcatgatggtgacaagagaagccatcttatggacctactt
catgcacagatggctaatggggttcacggcaagcatgctctaactttggtatttgtcgaa
acaaagaagggtgctgatgcattggagcattggctgtgtattaatgggtttcctgcgact
gccattcatggtgataggactcagcaggaaagggagcaagcgttgagaacattcaagaga
ggagataccccaattttagttgcgacagatgtggctgctcgaggccttgatatccctcat
gtttctcatgttatcaactttgaccttcctaatgacattgatgattatgtgcaccgtata
ggcaggacaggccgtgcaggcaagacaggactagcaactgctttctttaatgaaggtaac
ctttcgatgtccaaacctctagctgacttgatgcaagaagctaatcaggaagtacccgaa
tggttgactcgttatgctagccgttcatacggaggtagaaacaggcgggctggcggaggc
cgttttggtgggcgtgacttcaggagggattcctcatacaatagaagtggaggtggtgtg
aattactatgatggaggtaatagtagtggtggttatggcaattacagtggaggatatggt
cctggagtaactagtgcctgggactag
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