Capsicum annuum (peppers): 107863623
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Entry
107863623 CDS
T04646
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107863623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107863623
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107863623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
AXE1
Motif
Other DBs
NCBI-GeneID:
107863623
NCBI-ProteinID:
XP_016565117
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Position
3:complement(101616687..101625206)
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AA seq
475 aa
AA seq
DB search
MMETDLGKLFIGGISWDTDEERLKEYFTSYGEVVEAVIMRDRNTGRARGFGFVVFANPAV
AEGVVNNKHIIDGRTVEAKKAVPRDDQQIINRNNSSIQGSPGLGRTKKIFVGGLASTVTE
SDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEDAVDRVLYKTFHNLNGKMIEVK
RAVPKELSPGPNRSPFTGYNYGLGRINNFLNNYAQGYSLGSVGTYGVRMDGRFSPVASGR
TSFSQLTSPTYGMGVNLDPALSPTFAGASNFSKSLGYGRVLNPYVTGNSSRYTTPIGYNT
GSSKGDSLLSSPTRNVWGNGGLNSSPVPGSSGSFLGSGTGSYGVFGNNGASWGSSPVSTP
FGSASGYGGRNVGFRSGGNSYGPGSGGLARSNAAGAVANSFAVSSGAYEGSYGDVYRSGS
TYGDPTWQAVSSDMDGSNTFGYGPENPADDSARDSENYIGNYSIANRQSNRGIAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagatctcggtaagctatttataggtgggatatcttgggacacagatgag
gagcgtcttaaagaatattttacttcatatggagaagtggttgaagctgtgatcatgaga
gatcggaatactggtcgtgctcgtggttttggttttgttgtttttgctaatcctgctgtt
gctgaaggagtcgttaacaacaagcacatcatcgatggcagaacggttgaggcaaagaag
gctgtccctagggatgaccaacagataataaatagaaacaacagcagcattcaaggatca
cctggtcttggacgcaccaaaaagatatttgtaggaggtttagcatctacggttactgag
agcgacttcaagacatactttgatcagtttggtacaattacagatgttgtagtgatgtat
gaccacaacactcagaggccaagaggctttggatttattacttatgagtcagaggatgct
gtggatagggtattgtataagacctttcacaatctaaatggtaaaatgattgaggtcaag
cgggccgttccgaaagagctgtctccggggcccaaccgaagccctttcacaggatacaac
tatggacttggtagaataaataactttctcaacaactatgcgcaagggtatagtttaggt
tcggttggaacatatggggtcaggatggatggtagatttagtccagttgccagtggacgt
acaagtttctctcagttaacttctcccacttatggaatgggtgtcaatttggatccagct
ttgagccccacctttgcaggagcttccaattttagcaagagtcttggttatgggcgtgtt
cttaacccttatgtcactggtaactcaagcagatacactacgcccattggatataacaca
ggcagcagtaaaggtgattctttgcttagctcaccaacaaggaatgtatggggaaatggt
ggtcttaacagttctccagttcctggtagctccggttcatttttgggctctggaactggt
agttatggggtctttgggaataatggtgccagttggggctcgtcgcctgtttctactcca
tttggtagtgcttctggatatggtggtcggaatgttggtttcaggagtggtggaaacagt
tatgggccgggatctggaggacttgcaagaagcaatgcagcaggtgctgtcgcaaattca
tttgctgtgtcaagtggtgcgtatgaggggtcttatggagatgtatatcgcagtggctca
acatatggtgatccaacttggcaagctgtgtcttctgatatggatggctctaatacattt
ggatatggacccgaaaatccagcagacgattcagctagagactccgagaattatattgga
aattatagtattgcaaatagacaatcaaatagaggaattgcagcgtag
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