Capsicum annuum (peppers): 107863651
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Entry
107863651 CDS
T04646
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107863651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107863651
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
107863651
SWR1 complex
107863651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Cas3-like_C
Motif
Other DBs
NCBI-GeneID:
107863651
NCBI-ProteinID:
XP_047264148
LinkDB
All DBs
Position
3:complement(97609475..97685985)
Genome browser
AA seq
2035 aa
AA seq
DB search
MASKGYKGKPDHETRVRRQKGLEASKVPQRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKRVKEEEQRLRKVALNISKDIKKFWLKIEKLVLYKHQLALD
EKKKKALDKQLEFLLGQTERYSTMLAENLVSSPSTCKQTNSLSAPEALRIHCSEGSEGDL
INRDCVGENLQHHSTGSDIDDDFGVQSEDETEDDEHTIEEDEAVITKEEREEELAALQNE
MDLPLEELLKRYAAGEASRDRSPEKSGEHVTVSSGKGSDKCRNIDATTETNDGRSPAISG
RRSVESNGVLSCPNNHCSNLGKDKLRSPQKKYQEFDKINLLGDFNDEQDDDDYVLAVGED
KGYNMDDEKTLLEEEELAKAEAYDAADEIALLQKESELPLDELLARYKEDFDTDENMGYD
SESYASASDDLPESLAQNASESNRINGGPRDVLATTIAENEEKEVENVDKTGEERQSEDI
IANAAAAARSAQPTGSTFSTTKVRTKFPFLLKFPLREYQHIGLDWLVTMYEKKLNGILAD
EMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLRWCPAFKILTYFGSAK
ERKIKRQGWLKPNSFHICITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL
NFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNK
EVVDRLHNVLRPFILRRLKRDVEKQLPSKHEHVIYCKLSRRQRNLYEDFIASSETQATLA
SSNFFGMISVIMQLRKVCNHPDLFEGRPIMSSFDMSGIDMHLSSSICSMLSPGIFSTVNL
GALGLLFTHLDFLMTSWERNDVQSIATPSSLIVSRISLIHGEETSQGLERYKKFHGTNIF
EEIQKALAEERLREAKERAAAMAWWNSIKCKQKPVYSTSLREIVTVEHGIYCQRSNPLSF
LYSARLAESILSPIERFQLMVDQVETFMFAIPAARAPAPACWCSKSDASVFFSPTFKKTC
SEVLSPLLTPLRPAIVRRQVYFPDRRLIQFDCGKLQELAGLLRRLKSEGHRALIFTQMTK
MLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGA
DTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLV
IQSGSYNTEFFKKLDPIELFSGHKTVSLKNIEVERNSNITEVQLSNADVEAALQNVEDEA
DYMALKKVEEEEAVDNQEFTEETVVRMEDDELGNDDEMKADEPADHEALVTTSNTELVTV
SSDSNPLKEQAITFAGKEDDIDMLANVKQMAAAAAAAGQAILSFESQLRPIDRYAVRFLE
LWDPIIDKTAIESQGHFEETEWELDRIEKLKEDMEAEIDDDEEPLVYESWDTDFATEVYR
QQVETLAQHQLMEELKAEAKEKELAEYEYSIGHTSSAPKTKSKKKAKKTKFKSLRKGGLA
SERLALKEEPSLELIDDDTLSSEPVTTPDSAQERKRKLATYEEDVKSAKKSKKLKKSSEV
SSLVKHSTYHGKRQVESKELKPYDVGTANIELRSISRSKVGGKVSINPMPVKRVLTIKSE
RPIRKGKTWSKDYFPSADSWLPQEDAVLCAAVHEYGPHWSLMSDILYGMTAGGVYRGRYR
HPLHCCERFRELLQRYVLSAADNVYDRSNSTGSMKGLLKVTEENVQLVLDIASEIPDHES
LVQKHFLALLSSVWKVRKSHTNAFSSSQNGLYHSGSLFTPIVNSVSTNYSMVPPAKRFSN
LSVCAKLVAVALSDQQSAQSDERVSICDQREVASFPAEHLDITLEFGAEKDDKTIPVQYP
VTVKIISPESPSSPRITIAEHHHYKSSQIMAENRFWAASNTEGCLDWASLAFPIGDAKSR
TPLKSQFLGKHKPTDSVKVSKSKSRKISTESGDVGLTKDLVLPPMPSVSNDSCPTADMGL
IFLTESGNGFEDRTLLDINSVFNASSENVLRHEYVPNFISGLDDWSVFPEFTDIG
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaaagggtataagggtaagccggaccatgaaacacgcgtccgacgtcaaaag
ggtcttgaagcctctaaagtacctcaacgacctaaaacacactgggatcatgttcttgag
gagatggtctggttgtcgaaggacttcgaatcagagaggaagtggaagttggctcaagcg
aagaaggttgctttacgagctagcaagggaatgcttgatcaggcgacacggggggaaaag
cgggttaaggaagaagagcaacgtctgcgtaaagttgcactcaatatctcaaaggacatc
aaaaaattttggttgaaaatagagaagctggttctttacaagcatcagttggcgctagat
gagaagaagaaaaaagcacttgacaagcagctagagtttcttcttggacaaacagaaagg
tactcaacaatgcttgcagagaatcttgtaagttcaccaagtacttgcaaacaaaccaat
tctttgtctgcaccagaagcattgagaatccactgtagtgaagggagtgaaggggattta
atcaatcgtgactgtgtcggagaaaatcttcaacatcattctactggtagtgatattgat
gacgactttggtgtgcaatctgaagacgaaacggaagatgacgagcatactattgaagaa
gatgaggctgttataactaaagaagaaagggaagaagagttagctgctttacaaaatgaa
atggatctacctcttgaggagcttcttaagcgttatgcagctggggaagctagcagagat
cgtagccccgagaagagtggtgaacatgttacagtcagttctggcaagggcagcgataaa
tgtagaaacattgatgctactactgagaccaacgatggccgctcacctgcaatttctggt
cgtcgttctgttgaaagtaatggcgtcttatcatgtccaaataatcattgttctaaccta
gggaaagacaagctaagaagtcctcaaaagaagtatcaggagttcgacaaaattaatttg
ttgggtgactttaatgatgaacaggatgatgatgattatgtccttgctgttggtgaagat
aaaggatacaatatggatgatgaaaaaactttgttagaggaggaggagttggcaaaggca
gaagcatatgatgctgcagatgagattgcgctgttgcaaaaggaaagcgaacttccttta
gatgagctccttgctaggtataaagaggattttgatactgatgaaaatatggggtatgat
tctgaatcatatgcgtctgcttctgatgatcttccggaatcactagcacagaatgcatct
gaatccaatagaataaatggtggtccgcgtgatgtattggccactacaatcgctgaaaat
gaagaaaaggaagttgaaaatgtggataaaacaggggaagagaggcagagtgaggatata
atcgccaatgcagcagctgctgccagatcggcacagcccacgggtagcaccttctcaaca
accaaagtgcggactaagttcccattccttctaaaatttccccttcgtgagtatcaacat
attggtttagactggcttgtgaccatgtacgagaagaaacttaatggaatcctagcagat
gaaatgggtttggggaagactatcatgacaattgctctgcttgctcacctcgcatgtgaa
aaaggaatatggggccctcatcttattgttgtcccaactagtgtcatgctaaactgggag
actgagtttcttagatggtgtcctgctttcaaaatcttgacatattttggcagtgcaaaa
gagcgaaaaattaaaaggcaaggctggttgaagccaaactcgtttcatatatgtatcaca
acttacagacttgttatacaggactccaaagttttcaagcgtaagaagtggaaatacctg
attttagatgaagctcatctaatcaaaaattggaaatcacaaagatggcagacacttctc
aattttaactcaaaacggcgtattcttttgactggtacaccattgcagaatgatcttatg
gagctgtggtctctaatgcatttcttgatgcctcatatttttcaatctcatcaagaattc
aaagattggttctgtaatcctatttctggaatggttgagggacaagaaaaggttaataag
gaagttgttgatcgcttgcataatgtccttcgtccctttattctccgccgcttgaaaagg
gatgtggagaagcagcttccttcaaaacatgagcatgtaatttattgtaagctctcaagg
aggcagcgtaacttgtatgaagactttattgctagttcggagactcaggccactctagct
agttcaaatttttttgggatgataagtgttataatgcaacttcgcaaagtgtgcaatcat
cctgacttatttgaaggacgtccgataatgagctcctttgatatgagtggtattgatatg
cacttgagctcttccatttgctcgatgctttcacctggtatattttcaactgtcaacctt
ggtgctttggggttgttgtttacacatcttgattttttgatgacatcttgggagagaaat
gatgttcaatccattgctaccccatcaagcttgattgtgagtcgtatctctctgattcat
ggtgaagaaacttcacaaggacttgaacggtataagaagtttcatggaacaaacatattt
gaagagatccaaaaggcacttgctgaggagagattgagagaagcaaaggagagagcagca
gctatggcatggtggaattccattaagtgtaagcagaaacctgtatattctacaagtctt
cgggagattgttactgtggaacatggcatttactgtcaaagaagtaatccgttgtcattc
ttgtactccgctaggcttgcagaatcaatactgtcaccaattgagagattccaactaatg
gttgatcaggttgagactttcatgtttgcaatccctgctgcacgcgccccagcacctgct
tgctggtgcagtaaatcagatgcttctgtatttttcagtccaacctttaagaagacatgt
tcggaggttctttctcctcttctcactcctcttcggccagccattgttagaaggcaagtc
tattttccagataggcggcttatacaatttgactgtggaaagctgcaggagcttgcaggt
ttgttgaggcgattaaagtcagaaggtcaccgtgcattaattttcacccaaatgacaaag
atgcttgatgttttagaagctttcattaatttgtatggttacacttacatgcgtctggat
ggttctactccgccagaagagagacaaactttgatgcaacgtttcaacacgaatccgaag
attttcctttttattttatcaacccgtagtggtggagttggcatcaacttggtgggtgca
gacactgtcatcttttatgatagtgactggaatccagctatggatcaacaagctcaagat
cgctgtcatagaattggacagacccgtgaagtacacatttatcgattgataagtgagagc
accattgaagagaatattttgaaaaaggcaaaccagaagcgtgcgctggatgatttggtt
attcaaagtggaagttacaacactgaattcttcaagaaactggatccaattgaattattc
tcgggccacaaaacagtttccttaaagaatattgaagtagagaggaatagcaatatcact
gaggttcagctctctaatgccgatgtggaggctgctctgcaaaatgtagaagatgaggca
gattacatggctctcaaaaaagttgaagaggaagaggcagtagacaatcaggagttcact
gaagaaacagttgtcaggatggaagatgatgaacttggtaatgatgatgagatgaaggct
gatgagcctgctgatcatgaagccctagttacaacatcaaatacagaacttgtgactgtg
tcaagtgatagcaatccgctaaaagaacaagcaattacttttgctggtaaagaagatgac
atcgacatgctggccaatgtcaaacagatggcagcagcagcagctgctgcaggacaagct
atcttgtcttttgagagtcagttacgtccaattgaccggtatgctgtacgttttctggag
ttatgggaccctatcatagacaagacagctattgagtcacaaggtcattttgaagaaact
gaatgggaattggatagaattgaaaagttgaaggaagatatggaagcagagattgatgat
gatgaagaacctttagtttacgaaagttgggatactgattttgcaactgaagtatacaga
cagcaggttgagactttggctcagcatcagttgatggaggaactaaaagctgaagctaaa
gagaaagagcttgcggaatatgagtactccatcgggcacacatcttctgctccaaaaacc
aagtcgaagaagaaggcgaaaaaaacaaagttcaaatctttgagaaaaggcggtctagct
tcggaacgtctagctttgaaggaagagccttcgttagagctcatagatgatgatactcta
tccagtgagccagttacgacaccggattctgctcaagagagaaaacgtaaactagcaaca
tatgaagaggatgttaaaagcgccaagaagtctaaaaaactgaagaagtcctctgaggta
tcttctctggtaaaacattcaacatatcatggaaagcggcaggttgaatctaaagaactg
aagccgtatgatgttggcaccgcgaacatcgaactcagatcaataagcagaagcaaggtg
ggaggaaaagtctcaatcaatccaatgcctgtaaaacgagttcttactattaaatcagaa
aggccgattaggaaaggtaaaacatggtctaaagattattttccatcagctgattcatgg
ttgccacaagaagacgctgtactttgtgctgctgttcacgagtatggtcctcactggagc
ttgatgagtgatatcttgtatggaatgactgctggcggagtttatagaggaagatatcgt
caccctctacactgttgcgagaggtttagggagctcctacagagatatgtgttatctgct
gcagacaatgtatatgatagatccaacagtactggctctatgaaaggtcttctcaaagtg
actgaggaaaatgtccaactggtgttggatattgcatcagagatcccagatcatgagtcg
cttgttcaaaagcatttccttgcccttctttcctctgtgtggaaagtgcggaaaagccac
acaaatgcgttctcatcttcccagaatgggttatatcattctggaagtttatttacacct
attgttaatagtgtttcgacgaattactccatggttccacctgcaaagagattttctaat
ttaagtgtgtgcgccaagttagtagcagttgctctttctgaccagcagagtgcacaaagt
gatgagagagtctcgatttgtgaccagagagaagtagcttcttttcctgctgagcatttg
gatattacactggaatttggggcagagaaagatgataaaacaattcccgtgcaatatcca
gtaactgtcaaaataattagtcctgaatctccatcgtctccaagaattacaatagctgag
catcatcattacaagtcttcccagattatggctgaaaaccgattctgggctgcatcaaat
actgaaggttgtttagattgggcttctcttgcttttcctattggggatgccaagtcacgt
actccattgaaatcacaatttctggggaagcataagcccactgattcggtgaaggtctcg
aaatctaagtccagaaagatttcaacagaatctggtgatgttggtctgaccaaggatcta
gtgttgccgccaatgccatccgtgtctaatgattcctgtccaacagctgatatgggatta
atattcctcacagaaagtggaaatggttttgaagataggaccctgttagacataaattcg
gtatttaatgcaagcagtgagaatgtactccgacatgaatatgttcccaactttatatcg
ggacttgatgattggtcagtgtttccagagttcacagatattgggtag
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integrated database retrieval system
