Capsicum annuum (peppers): 107863980
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Entry
107863980 CDS
T04646
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1 isoform X1
KO
K14485
transport inhibitor response 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107863980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107863980
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107863980
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107863980
NCBI-ProteinID:
XP_016565699
UniProt:
A0A1U8GCC2
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Position
3:complement(33642532..33647327)
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDKDRNAVSLVCKSWYEIERWCRRKIFIGNCYAVNPRIMIRR
FPEVRSIELKGKPHFADFNLVPEGWGAYVYPWILAMSKSYPLLEEIKLKRMVITDESLEL
IAKSFKNFKVLVLSSCDGFTTDGLAAIAANCRNLRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLVSEVSFLALERLVARSPNLRTLRINRAVPLEKLPYLLRRTSQLVEFGTGA
YSADVRSDYFSNLTEAFSGCKQLKCLSGFWDVVPAYLPAIYPVCSRLTSLNLSYATCQNP
ELGKLISQCHNLQRLWVLDYIEDFGLEELAANCKDLQELRVFPSDPFAAEPNVTLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALFTIARNRPNMIRFRLCIIEPRTPDYLTLGPLDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTNAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLSNAAKLETMRSLWMSSCSISFEACKMLAQKMPRLNVEVIDERGPP
DTRPESCPVEKLYIYRSVAGRRFDTPGYVWTMGEEAAVRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattccctgaagaagtactcgaacacgtcttctccttcctcagttccgac
aaagaccgtaacgctgtatcactcgtatgcaaatcatggtacgagatcgaacgttggtgt
cggaggaaaattttcattggaaactgctacgctgttaatcctaggattatgatccgacgg
ttcccggaagtcagatctattgaacttaaaggaaaacctcattttgctgactttaatttg
gttcctgaaggatggggagcgtatgtatatccatggattttggctatgtctaagtcgtat
ccattgttagaggaaattaagcttaaacgtatggttattactgatgagtcattggagttg
attgctaagtcttttaagaattttaaggttttggttttgtcttcttgtgatggttttact
actgatggacttgctgctattgccgctaattgcaggaatctgagagaactagacttggga
gagagtgaagtggaggaccttagtggacattggctaagccattttcccgatagctgcacg
tcacttgtttctcttaacattgcctgtttggtttcggaggtcagtttcttagctttggag
cgcctggttgctcgttctcctaatttgaggactctacggataaatcgtgccgttcccctt
gagaagcttccatacctgcttcgtcgcacttcccagttggtcgaatttggtacaggtgct
tactctgctgatgtgcggtctgattacttctctaacctgacagaagctttttcgggctgc
aagcaacttaaatgtctgtctgggttttgggatgttgtaccggcttaccttccagctata
tatccagtgtgttcgagactcacctccttgaatttgagttatgctacctgtcaaaaccct
gagcttggcaagctcataagtcagtgtcacaacttgcagcgtttgtgggtgctagactac
attgaagattttggtcttgaggagcttgctgccaattgtaaggaccttcaagagctgagg
gttttcccttctgacccgtttgctgcagaaccaaatgtgaccttgacggagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttgtacttctgccgccaaatg
actaatgcagctttatttaccatcgccaggaatcgtcccaacatgattcgtttccgcttg
tgtatcattgagccgcgaactcctgattacttaacccttgggccacttgatgctggtttt
ggggccattgtggagaactgtaaggaattgcggcggctttcactttctggcctccttacg
gaccgtgtcttcgagtacattggcaccaatgctaaaaagttagagatgctgtccattgct
tttgctggtgatagtgatctgggactccaccatgtgctttctggttgtgaaagcctccgg
aagttggagatcagagattgtccgtttggagacaaggctctcttgtctaatgctgcgaag
cttgagacaatgcgatccctttggatgtcttcgtgttcaataagttttgaagcatgtaag
atgctagctcagaagatgcctaggcttaatgtggaagtaatagatgaaaggggtcctcca
gatacaaggccagaaagctgccctgtggagaagctttacatatatcgatcagtggctgga
cggaggtttgacacacctgggtatgtttggacaatgggtgaagaagcagctgtgaggttg
tcctga
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