Capsicum annuum (peppers): 107864073
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Entry
107864073 CDS
T04646
Name
(RefSeq) syntaxin-43 isoform X1
KO
K08489
syntaxin 16
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107864073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107864073
Membrane trafficking [BR:
cann04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
107864073
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
DUF3519
HAMP
Motif
Other DBs
NCBI-GeneID:
107864073
NCBI-ProteinID:
XP_016565819
UniProt:
A0A1U8GCM9
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Position
3:complement(27020288..27025876)
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AA seq
316 aa
AA seq
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MATRNRSRVFKSYRDTLNDNRIPFTSSSSSVIEMPTSSFLNSNPSYAPLSTQEDVAPSTS
RDAFTVGLPPAWVDVSEEVAASIHQAQVKLAELKKCHAKALTPSFGDGREDQHVIEVLTM
EITDILRKSEKRLQKLSARGSSEDSNVRKNVQRSLATDLQNLSVELRRMQSLYLKQLRQQ
SEGHDGLDLEMNEKKSSFLDDDFNDVGFTDLQMATGHRDEQFTAEREREIRQVLKSVNEL
AQILKDLSVLVIDQGTIVDRIDHNVQSVSASVEEGFKQLQKAERSQRKGGMVKCATVLVI
MCFVMLVLLVLKQILL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagaaatagaagtagggttttcaaaagttacagagacacattgaacgataat
cgtatacctttcacttcttcttcttcttcagttatcgaaatgcccacttcttcttttctt
aattctaatccttcctatgctcctcttagtacccaagaagatgtcgctccttctacatcc
agggatgcatttacagtgggtttacctccagcctgggttgatgtttctgaagaagttgca
gctagcatacatcaggctcaagtcaaattggcagaattaaagaagtgccatgctaaagct
ctgactccatcttttggtgatggaagagaagatcaacatgtgatagaggttctgaccatg
gagattacagatatattaaggaagtcagagaagagattacagaagctttcagcaagagga
tcttctgaggattcaaatgttagaaaaaatgtgcagcgttctctggcgacagaccttcaa
aacctttctgttgagcttcggaggatgcaatcactgtatcttaaacagttgcggcagcaa
tcagagggacatgatggacttgatttggagatgaatgaaaagaagtctagctttctggat
gatgatttcaatgacgtggggttcactgatctgcagatggccactggtcatagggatgag
cagttcacagcagagagagaaagagagattagacaggtcctcaaatcagttaatgagctt
gcccaaatcttgaaggatctgtcagtcctagtgattgatcaggggacaatagttgatcgg
atagaccacaatgttcaaagtgtgtcggcatcagtagaggaaggcttcaaacaactacag
aaggcagagaggtctcagaggaaggggggaatggtgaaatgcgcgactgttcttgtaatc
atgtgcttcgttatgctagtcctgttggtccttaagcagattctcttataa
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