Capsicum annuum (peppers): 107864154
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Entry
107864154 CDS
T04646
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107864154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107864154
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107864154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107864154
NCBI-ProteinID:
XP_016565926
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Position
3:complement(21140880..21148270)
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AA seq
317 aa
AA seq
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MAKTVPLSLSVGGGSRGGASSSSHGGGASITMDHQMQVAEQLVLNLRYHVRRERALLELS
KKRELFHDLAPLLCNSFGTSVVLLQELISIYPFLTPPNLTPAQSNRVCNVLALLQCVASH
PDTKMSLLSASIPLYLYPFLVTRSKSRPFEYLRLSSLGVIGALVKADDTEVIRALLSPEI
ILSFLRSMDIGCELSKTVATFILQKLLLDDVGLDYICTRAVKFFDVAQVLGNMVGELVEQ
PSSRLLKYIIRCYLRLSDNQRACDALRTCLPDMLRDTTFNSCLREDPVTRMWLQELLQKV
NGNLVALQTGGSLNRIH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaccgtacctctatctctctcagttggcggtggcagcagaggaggagcatca
tcgtcgtctcatggtggtggagcctcgattactatggatcaccaaatgcaagttgctgaa
caacttgttctcaatcttcgttaccacgttcgtcgtgaacgcgctcttctagaactttct
aagaagagggaacttttccatgatttggcccccttgttgtgcaactcatttggtacttcc
gttgtactcctacaggagttaatttctatatacccctttttgacaccgccaaacctgact
cctgcacaatcaaatagagtttgtaatgtactagcacttttgcaatgtgtagcctctcat
ccggacaccaaaatgtcattactcagtgcaagtattcctttgtatttgtacccttttctt
gttacaagaagcaagtctagaccttttgaatatttgaggctttctagcttaggtgtcatt
ggcgccctcgtgaaggcagatgatactgaagttatccgtgctcttctttcaccagagata
attctgagtttcctgcgctcgatggacattggatgtgaactatccaaaacagttgcaact
ttcattctgcaaaaattgcttctagatgatgtgggtctggattacatctgtaccagagcg
gtaaagttttttgatgtagcgcaagttttagggaatatggttggtgaacttgttgaacaa
ccttcatctagattgctaaaatacataattagatgctatcttcgtctgtcggataatcaa
agggcatgtgatgcactgagaacttgtcttcccgatatgcttagagataccaccttcaac
agttgtcttcgcgaggatccagtgacgaggatgtggctgcaagaattgcttcaaaaagtc
aatgggaatctggttgctctacaaactggaggatcattgaaccgaattcattaa
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