Capsicum annuum (peppers): 107865808
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Entry
107865808 CDS
T04646
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03030
DNA replication
cann03410
Base excision repair
cann03420
Nucleotide excision repair
cann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107865808
03410 Base excision repair
107865808
03420 Nucleotide excision repair
107865808
03430 Mismatch repair
107865808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107865808
03036 Chromosome and associated proteins [BR:
cann03036
]
107865808
03400 DNA repair and recombination proteins [BR:
cann03400
]
107865808
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107865808
DNA Replication Termination Factors
ELG1-RFC complex
107865808
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107865808
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107865808
Check point factors
HRAD17(Rad24)-RFC complex
107865808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RuvB_N
AAA_5
AAA_11
AAA_24
nSTAND3
AAA_19
AAA_28
AAA_25
ABC_tran
MeaB
bpMoxR
RCF1-5-like_lid
AAA_30
DNAX_ATPase_lid
IstB_IS21
AAA_18
AAA_assoc_2
AAA_7
AAA_3
NTPase_1
RNA_helicase
KTI12
DO-GTPase1
SRP54
Motif
Other DBs
NCBI-GeneID:
107865808
NCBI-ProteinID:
XP_016567486
UniProt:
A0A1U8G823
LinkDB
All DBs
Position
1:5811341..5817022
Genome browser
AA seq
332 aa
AA seq
DB search
MASSSSSSSTGPEIPWVEKFRPNKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGK
TTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRL
MAVVAAEKVAYVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGF
AHMRICDGVGSYLQMCGLLAKLSLVRETAKAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttcttcttcatcatcaactggtccagaaatcccttgggttgagaagttc
cgaccgaacaaagtatccgacatcgttggcaacgaggatgctgtcgctaggctacaagtt
attgctcgtgatggaaatatgcccaatcttattttagccggtcctccgggtactggcaaa
accactagtatattggctcttgctcatgagcttttgggaccaaactataaggaggctgtc
ttggagctaaatgcgtcagatgatagaggcatagatgttgtcagaaacaaaatcaagatg
tttgctcagaagaaagttactcttccccccgggcgccacaaaataattattttggacgag
gctgacagcatgacatctggagctcagcaagcactgaggaggacaatggaaatatattcg
aactccactcgctttgcccttgcctgtaacacttcttctaagattatcgagcctattcaa
agcagatgtgccctggtccggtttgctagattatccgaccaagagatccttggacgcctt
atggctgtagttgcggcagaaaaggttgcatatgtacccgaaggtcttgaagctattata
tttaccgctgatggagatatgagacagggcttaaataacttacaagcaacacacagtgga
tttggttttgtcaaccaagaaaatgttttcaaggtttgtgaccaacctcatccgctgcat
gtgaagaatatggtgcggaatgtacttgaagggaaatttgatgatgcatgtgccggttta
aaggcactgtatgacctgggctattcccccactgacattatcacgacccttttccgaatt
ataaagaactatgatatggcagaatatgtaaagctggagttcttgaaggaaactggtttt
gcccacatgaggatctgcgatggggtcggttcatatctccagatgtgtggtctgctggct
aaactatcattggttcgagagacagctaaggctgcgtga
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integrated database retrieval system
