Capsicum annuum (peppers): 107866006
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Entry
107866006 CDS
T04646
Name
(RefSeq) protein argonaute 4B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107866006
03036 Chromosome and associated proteins [BR:
cann03036
]
107866006
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107866006
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107866006
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107866006
microRNA pathway
RISC loading complex
107866006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107866006
NCBI-ProteinID:
XP_047265622
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All DBs
Position
3:complement(244182572..244189026)
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AA seq
893 aa
AA seq
DB search
MASKELLLNLPPPPKEIPLGVVPMKVEPGKDCGPVSERLRPNFKQMNRPRPGVRGKKIDL
LTNYFRVCFQGGVSELYSYSVNVQYENGDPVSGSNLIRKVIHKLWEIYSSELGEQAFASD
GQQILFTTSPLPQKKLDFTVVLDAATSKRSRTDGNFSGDGDLSEGDQKRQKIIPRLKTFI
VQITFVSIIPFRTILDGQHGVKSGNSEVLIALDTILQHCNAKRNCIMLRQSYFPNEIKNF
MDLTGGILGCRGYHSSFQSVQGGLFLNLDTSTTTVIQPGPLVNFLMANQNVETPFKIDWA
KAKILKNIRIKLLHSNREHKITGLSNRTCKEQKFLLRLKGSDNQSDNVQTVEITVYEYFV
KKRGIELRYSSNLPCINVGSHREPKFIPVELCSLVPLQRFKKELYLHQRSILVSKSSQKP
IELMKDLNEELKNNNYDTDPMLRACGISISKSFTELEGRILSPPQVRVGNKEDLAPRFSR
WSFNGKKFVEPKSIEFWAVVNFSTGSDIRAFCIEMAKLGATKGMNINPPAFVFEENAKHK
KKPGSVRVDKMFEQIIPKFRKDPPRFLLCFLPAKFSNLYGPWKKKCLMDFGICNQCIAKN
RVDETYLANVILKINATLGGRNFMLSSEVSQTIPLASKVPTMILAMGVTHAPFSRSDLPS
VAAVVGSTQWPMISCYRASICTQPPKTEMIHSLFRPVSDSEDTGIIRELLMGFHSSSGMR
RPEQIIIFRQGLSESQFKQIISEMEEIIKACKFLDDTWSPKFTLIVAQRRHHTKMFQANS
SDNILPGTVVDTKICHPLYNNNFYMCAHAARVGTSRPNHYFVLLDEIGCSSDNVQELVHC
LCYVSQRCTSAIHEVAPLRYARLASAQMLEIMKTEGPQLPKLHKNVRDTMFFC
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaaggagttattgctaaatttgccaccccctcccaaagaaattcccttaggt
gtggttcctatgaaagttgaacctggaaaagattgcggaccagttagcgagagattgagg
ccaaactttaagcagatgaacagacctcgtccaggggtcaggggaaagaagatagatctg
ctaacaaactattttcgagtatgctttcaaggtggcgtaagcgaattatattcgtacagc
gttaatgtccaatatgaaaatggggaccctgtcagtggaagcaacttaattagaaaagtg
attcataaactctgggagatatacagctccgagttaggagagcaagcatttgcttctgat
gggcaacagatcttatttacaactagtcctctaccgcagaagaagctagatttcacagtt
gtgcttgatgctgcaacatcaaaaaggagcaggacagacggcaactttagtggcgatgga
gacttaagtgagggtgatcaaaagaggcagaagatcataccccgattaaaaactttcata
gtgcagataacatttgtttccatcatcccctttcggaccattcttgatggacaacatgga
gtaaaatcaggaaatagtgaagttctgatagcattagacaccattttgcaacactgtaat
gcaaaaaggaattgcattatgcttcgccaatcttactttcccaacgagataaagaacttc
atggacttgactggtggtatacttggatgccgaggttatcattcgagtttccaatctgtt
caaggtggattatttttgaaccttgatacatctacaacaacggttatacagccaggtcca
ctagttaacttcttaatggccaaccaaaatgtggaaactcccttcaaaatcgactgggct
aaggcaaagatcttgaaaaatatcagaattaagctattacactccaatagagaacacaaa
atcactggacttagcaacaggacatgtaaagagcagaagtttcttctgcgactgaagggt
tctgataatcaaagtgacaatgtccagaccgttgagataactgtttatgaatattttgtc
aagaaacgcggaatagaactccgttattcatcgaacttgccatgcatcaatgtagggagc
cacagggaacccaagttcattcctgttgagctctgttcattggttcccttacaacgattc
aaaaaggaattatacttacaccaaagatccatattagtgagcaagtctagccaaaagccg
atagaactcatgaaggatttaaatgaggaacttaaaaacaacaactatgacactgacccc
atgctgcgcgcttgtggaatctcaattagcaaatcgtttactgaattagaaggaagaatt
ctatctcctccacaggtgagagtgggaaacaaggaagatctcgctccaagattttcgcgc
tggagctttaatggcaagaagtttgtagagccaaaaagcattgaattttgggctgtggtg
aacttctccactggttctgacatacgtgcattctgcattgaaatggcaaaattgggtgca
acaaagggaatgaacattaatccaccagcatttgttttcgaagagaatgctaagcataaa
aagaaaccgggttctgttcgagtggacaagatgtttgaacaaataattccgaaatttcgg
aaggatcctcctcgattccttctttgctttcttcctgcaaagttttctaatttatatggt
ccatggaagaaaaagtgccttatggacttcggaatttgtaaccagtgcattgcaaagaac
agagttgatgaaacttatcttgctaatgttatcttaaaaattaatgcaacacttggtggt
aggaattttatgttatcatctgaagtttcacagactatccccttggcttctaaagtaccc
acaatgatcttagcaatgggcgttacacatgcacctttttcacggtcagatttaccctcc
gttgctgcagtggtcggttctacacagtggccaatgatttcttgctatagagcatcaatt
tgtacccaaccaccaaagaccgagatgatacattcactctttagaccagtttcagatagc
gaggacacaggcataatcagggagctgctgatgggttttcattcaagctcgggaatgagg
aggcccgaacagattattatattcagacaaggtttaagtgaatctcaattcaagcaaatt
attagcgaaatggaggaaattatcaaggcctgtaagttccttgacgacacttggtctcct
aagttcactctaattgttgcacaaagaagacaccacacaaaaatgttccaagccaactcc
agcgacaatattcttcctggcacggtcgtcgatactaaaatttgtcatccgctgtataat
aacaacttctacatgtgtgcacatgcggcaagagttggaactagcaggccaaatcactac
tttgttctgttggatgagattggctgctcgtccgataatgtacaggagctagtccactgt
ttatgctacgtgtctcagagatgcaccagtgccatacatgaagttgctccattgcgttat
gctcgtttagcttcagctcagatgttagaaattatgaagaccgaggggcctcaactgcca
aagttgcacaaaaatgtgcgcgatacaatgttcttctgctga
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