Capsicum annuum (peppers): 107867222
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Entry
107867222 CDS
T04646
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107867222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107867222
03036 Chromosome and associated proteins [BR:
cann03036
]
107867222
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107867222
Coactivators
SAGA/TFTC/STAGA complex
107867222
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107867222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
107867222
NCBI-ProteinID:
XP_016568854
UniProt:
A0A1U8GL82
LinkDB
All DBs
Position
4:221125863..221140608
Genome browser
AA seq
933 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNSQSQPSDSDSVPLSQGSSYTSN
QFAPWQTSNPDENASRRSLQDSESMQQKEEKLSDMQLKRHDTDSQNQQQKNDSSQEINSL
PLQHISQDSYQTTEVEQDTLHSSKAVNMQNPEKNTQNPESQHINFQGANSLQSMQSLTAG
TSGMPRVATEASNQSESASGSSSQAAMNVAKQSKQVPFAMLFPHIQPQLDKDRAMQLQTL
YLKLKKNEISKETFVRHMRSIIGDQMLKMAVYKFQSQASKNSQTAPGQFPQSQASQQQHS
QMPADDSSNMAIESKAQKLHEVEKQADLHGAQGSQMHSSSLITVKQERDRTPFPVQGLNR
QQQQHLHFSQASFPTFSNAGNNYSAYSASNVNSSTTQPLKQQSDDAQMRQISAQQSRNAT
QFGVPAQAMGMMGAPKFEKQSTFGEAKRLPAVSLNISSTSRIQQTSVQWQASANKEQKSI
HSSPMTNPKPEPIDHFPDQLQRSQLSPFSSIQVDQGNSTSESSKDESIEQTSKIGLSTTT
SMKPSNSGSSSMTSHMDASTLLSSRTPSVASSLGPGNNGKTPVKKPSIGQKKPLDALGSS
PPPSGKKQKVSGAFLDQSIEQLNDVTAVSGVDLRAEEEQLFSGPKEDSRVSEASRRVVQE
EEERLILQKIPLQKKLTEIMAKCGLKNMSSDVERCLSLCVEERMRGLISSLIRLSKQRVD
IEKSRHRIIVTSDVREEILSINRKAREEWEKKQADVEKLQKANEPEGSNGVDSDKEKDDG
RGKSIRVNKEEDDKMRTTAANVAARAAVGGDDMFSKWQLMAEQARQKREGGGDVASGSQP
GKDETRKNLSVPTKSSRDHQEAEKRIRASAIATPGAVRRAGRNQVVTQTRIARSITVKDV
IAVLEREPQMSKSTLVYRLYEKARSNASSAEST
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctatcatgaaactccttgaagaagacgaggatgagactatgcattcgggg
gcggatgtggaggcatttactgctgccctaaatagggatattggtggagataattcacaa
tctcagccgtctgattctgatagcgtaccattgtctcaaggaagcagttatacctcaaat
cagtttgccccatggcaaacttctaaccctgatgaaaatgccagtcgtcgtagccttcaa
gattcagagtccatgcagcaaaaggaggaaaagttgtctgatatgcagttaaaaagacat
gatacagattctcagaatcagcagcaaaaaaatgattcatcgcaggagatcaattcccta
cctttgcagcatatatcccaggacagttatcaaaccacagaggttgaacaggacacactt
cattcttctaaagcagtaaatatgcagaatcctgaaaagaatactcaaaatccagaatcc
caacatataaactttcagggagcaaatagtctacaatccatgcagtccttgacagcagga
actagtggtatgccacgtgtggcaacagaggcaagtaatcagtccgagtcagcaagtgga
tcaagtagccaagcagcaatgaatgtagctaagcagagcaaacaagtgccttttgccatg
cttttccctcacatacaaccccaacttgacaaggacagggcaatgcaactccagactctt
taccttaaactcaaaaaaaatgaaatttctaaggaaacttttgtaagacacatgagaagt
ataattggtgaccagatgctcaaaatggctgtatataaatttcaatcccaggcatctaaa
aactcacagactgctcccggtcaatttcctcagtctcaggcttcgcagcagcaacactcg
caaatgccagccgatgattctagcaatatggcaattgagagtaaagctcaaaagttgcat
gaggttgaaaaacaagccgatttgcatggagcccaaggaagccagatgcattcttctagt
ttgattactgtaaaacaagaaagagatcgcacaccatttccagttcagggacttaatagg
caacaacagcagcatttacacttctcgcaggcatcttttcccacattttcaaatgcaggg
aacaattatagtgcatattctgcatctaatgtcaactcttcaacaacacaacctcttaaa
cagcaatccgatgatgcacaaatgagacaaatttcagctcaacagagcagaaatgcaact
cagtttggagttccagcacaggccatgggaatgatgggtgcccctaagtttgaaaagcaa
agcacttttggcgaagccaaaagattacctgcagtgagtcttaatatttcaagtacttca
agaattcagcagacctcagttcagtggcaagcatctgccaataaagagcagaaaagtatt
cattcatcaccaatgaccaatccaaagcctgaaccgattgatcatttccctgaccagcta
caaagatcccagttatctcccttctcctctattcaagtggatcaaggaaattccacttcg
gaaagttcaaaggatgaatctattgaacagacctccaaaattggtttatcaacaaccact
agcatgaaaccttcaaattcaggctcgtcttctatgacatctcatatggacgctagcaca
ttgttaagttctcggacaccttctgtggcatcttcacttggtccaggaaacaatggaaag
actcctgtgaaaaagccttccattggacagaagaagcccctcgatgcgctaggttcctca
cctccaccttcgggaaagaagcaaaaggtgtcgggagcttttttagatcagagcatcgaa
caacttaatgatgttactgctgttagtggagttgatctaagggcagaggaagagcaacta
ttttctgggcccaaggaggatagtcgagtttctgaagcatctcgacgagttgtgcaagaa
gaagaggaaaggctgattttgcagaaaattccacttcagaagaaattgacagaaatcatg
gcaaaatgtggtttaaagaatatgagcagtgatgtggaacgatgcttgtcattgtgtgtg
gaggaaagaatgcgtggacttataagtagtctcatcagactgtcaaaacagagagttgac
attgagaagtcaagacacagaataattgtcacctcagatgttcgtgaagaaatcttgtca
atcaatcgaaaagcccgggaagaatgggaaaagaaacaagctgatgtggaaaagctccag
aaggcaaatgaacctgaaggtagtaatggagttgacagtgataaggagaaggatgatggc
cgcgggaaatcaataagggtaaacaaggaagaggatgataagatgcgaactacagctgca
aatgttgctgctcgagctgctgtcggaggggatgacatgttttcaaagtggcaattaatg
gctgagcaggccagacaaaagcgtgaagggggaggtgatgtggcttctggttcacagcct
ggtaaagatgagactcggaagaatttatcagttcccacaaagagctcaagggaccatcaa
gaagctgagaaaaggatccgtgcatctgcaatagccacacctggtgctgtgagaagagcc
gggagaaatcaagtggtaacacaaactaggattgctcgcagtattactgttaaagatgtg
atcgctgtcctagaaagagaacctcaaatgtctaagtctacattggtataccgcttgtat
gagaaagctcggtccaatgcttcatcagctgaatcaacctga
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