Capsicum annuum (peppers): 107867564
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Entry
107867564 CDS
T04646
Name
(RefSeq) uncharacterized protein LOC107867564
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03013
Nucleocytoplasmic transport
cann03015
mRNA surveillance pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107867564
09122 Translation
03013 Nucleocytoplasmic transport
107867564
03015 mRNA surveillance pathway
107867564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107867564
03041 Spliceosome [BR:
cann03041
]
107867564
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107867564
Spliceosome [BR:
cann03041
]
Complex C
Other components
EJC/TREX
107867564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
107867564
NCBI-ProteinID:
XP_016569340
LinkDB
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Position
4:complement(202918618..202929093)
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AA seq
792 aa
AA seq
DB search
MSDYPVLDNLPINKWKVAELREELKRRNLTTKGLKDELVRRLNEAICKEMEVAEFKEHKD
DDRDIDPASGVEDTEPEPDPVKLADDVLEHPQDEFDDINGDVARASTKICLVEIDQNKVS
DEVATGGTGDASGERKNSEAPVGNTSVINDIKSTDQFVEDKTDMEQEVFDSSQNNDVVDR
VSGIKDVGIQDSSTGQDAVDMKDSSSGGVLENNLWRQENDVEVTPVTSKEALENSNIKLE
NEGLKLSGMDAESDMSNPGTQVYEVNPDLGSQIKSDSFSTINENKNLNDNLNADNVKLVT
EVVRQEMELQSSSKDLSDVGGIHPLDDQTPHEMHGLVGETDNDRSSEVKFSMKHANADQV
SVAATMVEHGLESNTSYNSEQKDVQFKKARTLGDVIDPGSSSKKIETSAEDKHCIAASID
DRKVLSKISDVVDGENMEKIKLDQSSADDSMEEDVVETKHVDFDHIFKEGNDKAEERLTG
MTEEPKVLRNGSSDAMQLDNPSEKVESPQETKDRFPVLSEKRKFQDVVGGGSKEPAKRQR
SRNTEILRTAEPQNSSIALSENVEETALIKPVLGRTDSTVSEDAPKERVVPKSSKAATNS
LKIENFVRPFTLKAVQELLARTGEVCSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWP
PKGGRLLVTDFVDPQQVQTRMHGREPPTPATNPSPSVPPASSSVQAPLARLQGRKQQVES
EHPLTRPPPPAPPTAPPTKERLAPPVADKNDPPVITLDDLFRKTKAAPRIYYLPLTDEEV
AKKLASRGDAKN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattaccctgtgcttgataatcttcccattaataaatggaaggtagcagaatta
agggaagagcttaagaggaggaacttaacaacaaaaggtctaaaggatgagctggttagg
cgattaaatgaagctatatgcaaagaaatggaagttgctgaatttaaagagcataaggat
gatgatcgtgacattgatcctgccagtggtgttgaagatactgaaccagagcctgatcct
gttaaattagccgatgatgttctggagcatccccaggatgaatttgatgatattaatggt
gatgttgctagggccagcaccaagatttgtcttgttgaaatagaccagaacaaagtttct
gatgaggttgcaactggaggtactggtgatgcttctggagaaagaaaaaattcagaggct
cctgttggtaacactagtgttataaatgatattaagtctactgatcaatttgttgaagac
aaaaccgatatggaacaagaggtttttgattcttctcagaataatgatgttgtcgatagg
gtatctggaattaaggatgttggtattcaggacagtagcactggacaggatgctgtggat
atgaaagactcatcttctgggggagtgcttgagaacaatctttggagacaagaaaatgat
gtggaggtaaccccagtaacatccaaggaagccttggaaaacagtaacattaagttggag
aatgagggcctgaaactctcaggcatggatgctgagtctgatatgtccaatccaggcact
caggtatacgaggtcaaccctgatttagggtctcaaataaaatctgactcattttctacc
attaatgaaaataaaaatttaaatgataatttgaatgctgataatgttaaattagtaact
gaagttgttaggcaagagatggagctgcagtcatccagcaaagacctgtcagatgttggt
ggcattcatccattggatgatcagacgccacatgagatgcatggtcttgttggagaaact
gataatgacagatcttcagaggtgaaatttagcatgaaacatgccaatgcagatcaggtt
tctgttgctgcaaccatggtagagcatgggttggaaagtaacacttcgtataacagtgag
caaaaagatgtacagtttaaaaaagctagaactttaggtgatgttatagatcctggttcg
tcatccaagaaaatcgagacatctgctgaagataaacattgtattgctgcttccattgat
gatagaaaagttttgagcaagatatctgatgttgtggatggtgagaatatggaaaagata
aaattggatcaatcttcagctgacgattcaatggaggaggatgtagtagagacaaagcat
gtggattttgatcatatttttaaggaggggaatgataaggctgaagagcgtcttacggga
atgacggaagagcccaaagttctacggaatggttcttctgatgcaatgcagctagacaat
ccttctgagaaggttgagtctcctcaagaaactaaagataggtttcctgtattgtcagag
aagagaaagtttcaagatgtagtaggaggagggagtaaagagcctgcgaaaaggcagcgc
agtcgtaacactgagattttgaggactgctgagccacaaaattcaagtattgctttatca
gaaaacgtagaggagaccgcccttatcaagcctgtccttggcaggactgactctacagtt
agtgaggatgcacccaaggagcgtgttgtaccaaagtcttccaaagcagccactaattct
ctcaaaatcgagaacttcgtgcggccctttacgctgaaagctgtgcaagagctccttgca
agaactggtgaagtctgcagtttctggatggaccagataaagacccattgctacgtcacg
tattcttcggtagaggaagccatcgagacccgaaatgctgtttacaacctccaatggcca
ccaaaaggaggtcgtctcctggttacagattttgttgatccccaacaggtgcaaacaagg
atgcatggacgggagcctcctactccagcaacaaatcccagtccttcagtacctccagct
tcatcctcagttcaagcaccacttgctcggctacagggtcgcaaacaacaagttgagtcg
gaacatccactcacgcgcccgccaccacctgctcctccgaccgccccaccaacaaaagag
aggctggctccacctgttgctgataaaaatgatccccctgttattactctggatgaccta
ttcagaaagactaaagccgctccccgtatctattatttgccgctgacagatgaggaagtt
gctaaaaagcttgccagtagaggagatgctaagaactag
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