Capsicum annuum (peppers): 107867738
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Entry
107867738 CDS
T04646
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107867738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107867738
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107867738
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Paralog
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Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
DUF8496
Motif
Other DBs
NCBI-GeneID:
107867738
NCBI-ProteinID:
XP_016569603
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Position
4:171645249..171657982
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AA seq
372 aa
AA seq
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MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDVDEVLQSHTVYS
NVSKGVLAKSKDLTKAFGTDDQTKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQK
TINPETQHPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRAPMRLRIHV
PEQGSPSVLDKLQEWNASIVSREQSGSQHSIICEIEPSLFRDCDALIRNLQGRVEILVVN
VHVEGDTFVDQFDDHEDDSSRLRKDSTGSVQLLSEKMQKQTISSASENSMGEVKLNKPAK
SGSSEGEVKLNKCTTCNAVVGDSKEYREHFKSDWHKHNLRRKTRQLPPLTAEECMDDLEL
GDSKADLKEYSF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacgctggtgcagccgatagggcaaaagagacttactaatgttgcagttgtt
cgtcttaagaagcatggtaaccgtttcgaaattgcttgttataagaataaggtcctctct
tggcgttctggcgtagagaaagatgtggatgaagtgttgcagtcacatactgtttactcg
aatgtgtcaaagggtgtgcttgcaaagtctaaagatttgacaaaggcttttggaactgat
gatcagaccaaaatctgtctggagattttggacaaaggagagctgcaagttgcagggaag
gagagggaatcacagttgtcaagtcaattcagggatattgctaccatagttatgcagaag
acgatcaatcctgaaactcagcatccatacacaattagcatgattgaacgtctgatgcat
gaaatccattttgcagttgatccaaatagcagctcaaagaaacaggcactggaggtcatt
cgggagcttcaaaagcattaccccataaaacgagcccccatgaggttgaggatacatgta
ccagaacaggggagcccttctgtcctggacaagcttcaggagtggaatgcctccattgtg
tccagagaacaatctggaagtcagcactccataatttgtgaaattgagcctagtcttttc
cgggattgtgatgccttgataaggaatctacagggcagagtggaaattcttgtcgtcaat
gtacatgtggagggagatactttcgtcgatcagttcgatgatcacgaggatgattcatca
agattaaggaaggattccacaggttcagtccagctgctgagtgagaaaatgcaaaagcag
actatttcttcagcaagcgagaattccatgggagaagtaaaactgaacaaacctgcaaaa
agtgggagttccgagggcgaagtaaaactgaacaagtgcactacttgcaacgctgttgtg
ggagattcaaaagaatacagagagcattttaagagtgactggcataaacataaccttagg
cgaaaaactaggcaactccctccacttacagctgaagaatgtatggatgacctggaactc
ggggactcgaaagctgatctaaaagaatattcattttga
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