Capsicum annuum (peppers): 107867805
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Entry
107867805 CDS
T04646
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03030
DNA replication
cann03410
Base excision repair
cann03420
Nucleotide excision repair
cann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107867805
03410 Base excision repair
107867805
03420 Nucleotide excision repair
107867805
03430 Mismatch repair
107867805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107867805
03036 Chromosome and associated proteins [BR:
cann03036
]
107867805
03400 DNA repair and recombination proteins [BR:
cann03400
]
107867805
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107867805
DNA Replication Termination Factors
ELG1-RFC complex
107867805
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107867805
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107867805
Check point factors
HRAD17(Rad24)-RFC complex
107867805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_11
Mg_chelatase
AAA_5
AAA_16
nSTAND3
AAA_assoc_2
AAA_14
DUF3802
AAA_2
SLFN-g3_helicase
ResIII
AAA_24
PhoH
DUF3853
AAA_28
AAA_19
AAA_7
AAA_18
AAA_30
NPHP3_N
Parvo_NS1
DNAX_ATPase_lid
AAA_25
RNA_helicase
TIP49_C
DUF815
IstB_IS21
TIP49
bpMoxR
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-GeneID:
107867805
NCBI-ProteinID:
XP_016569721
LinkDB
All DBs
Position
4:99062162..99076242
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLMQSSQPWVEKYRPKQVKDVAHQDEVVRVLSNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSSRQGGYPCPPFKIIIL
DEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMGS
RILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKDLISVSGVIP
NVVVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDIVVDADDISDEQKARICK
KFAEADKCLVDGADEYLQLLNVASSTMQALSNMPQDMVY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacttatgcaaagctcgcagccatgggtcgagaaataccgaccaaagcaagtg
aaggacgtagctcaccaggatgaggtcgttcgagtcctctccaacactctcgaaacctct
aactgcccgcatatgctgttttatggtccacctggaactggaaagaccaccactgctctt
gccattgcccatcagcttttcggacctgagctgtataagtcgagggtattggagctaaat
gctagtgatgaccgtggtatcaatgtagttcgcacaaaaattaagaactttgctgctgtt
gctgtaggctctagtaggcaaggtggttatccctgtccaccttttaagatcataatcctt
gatgaagcagattcgatgactcaagatgctcaaaatgccttgcgacgtacgatggagaca
tattcaaaagttacgagattcttcttcatttgtaattacatcagcagaatcatagagcca
ctcgcttccagatgtgcgaagtttagattcaagccacttacagaagaaataatgggcagc
cgaatattgcatatttgtaaagaggaaggtcttaatctagattcagaggctctttctacc
ctcagttccatttctcaaggtgatctgcgaagggccataacatacttacaaagtgctgct
cggttatttggatcttcaatatcagcaaaggacctaattagtgtgtccggggtaatccca
aatgtagttgttcaggctatattctcagcttgcagaagtggcaattttgacttggcaaac
aaagaagtgaacaatgtcattgcagaaggatatcctgtttcccagatgctgtctcagttg
tatgatatagtagttgatgcagacgacatttctgacgaacagaaagcaagaatatgcaag
aaatttgctgaagcggacaagtgtcttgttgatggagcagatgagtatttgcagcttttg
aatgttgcaagcagcacaatgcaggcacttagtaacatgccacaggacatggtatattaa
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