Capsicum annuum (peppers): 107867846
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Entry
107867846 CDS
T04646
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107867846
Enzymes [BR:
cann01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107867846
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107867846
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
107867846
NCBI-ProteinID:
XP_047267905
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Position
4:112823767..112838817
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AA seq
622 aa
AA seq
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MEDIEDLLVGPGAGVPPGFRLPVKAAVGFNPKQRKKNGVTKLTLVQDSPAPKIPGTQTIY
IKTFGCSHNQSDSEYMAGQLSAFGYALSDNPDEADLWMINTCTVKSPSQSAMDTIISKGR
SAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPAL
DLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYAVDSLVGRVKNVIADGVGEIW
LSSEDTGAYGRDIGVNLPILLNAIVAELPLDGSAMLRIGMTNPPYILEHLKEIADVLCHP
CVYSFLHVPVQSGSDSILSAMNREYTVGEFRKVVDTLMELVPGMQIATDVICGFPGETDE
DFALTVDLIKDYKLAQVHISQFYPRPGTPAARMKKVPSNVVKQRSRELTAVFESFTPYTG
MEGKIERIWITDIASDGVHLVGHTKGYIQVLVIGPESMLGTSVMVKIASVGRWSVFGEVI
EILCPNSKDVRSHECFDERCSPCALSEEACARSKEQEPFTATSGWCSQCPTGESTTLLKN
DLQQDNHRSRNLTGWFLRNRKNQSSKKMDLTSLESEERQIQDLGRPSAWSPVDMALLSGI
LLSLFAIVILFLNLGSRSLSSK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaagacattgaagatttactggtgggtcccggcgccggagtgcctcctggtttccgg
ttacccgtgaaggcagccgttggattcaacccaaagcaaaggaaaaagaacggtgtaacg
aagctaacactggtccaagactctccagcacctaaaatacctggcactcagactatttac
atcaagacatttggatgttctcataatcagagtgattccgaatatatggctggtcagctt
tcagcgtttggttatgctctgagcgataaccctgatgaggcagacctctggatgataaat
acctgcacagtcaaatctcctagtcagtctgccatggatactattataagtaaaggcaga
agtgcaaaaaagccattggtagtagcaggttgtgtcccacaaggaagccgtaatcttaaa
gagcttgaaggagttagtatagtaggagttcagcagattgaccgtgtggttgaggttgtg
gaagagactttgaaaggtcatgaagttcggctactaacccggaagacattaccagcactt
gatcttccaaaggtgcgaaagaacaagtttattgagattcttccaataaatgttggttgt
ttaggtgcttgtacttattgcaagacgaagcatgcccgtggtcatttaggaagttacgct
gttgatagccttgtgggccgagtcaaaaatgtcattgctgatggagtgggggagatctgg
ctgagcagtgaagacaccggggcatatggtcgtgacattggagtcaatcttcctattcta
ttgaatgcgatagttgcagagcttcctctggatggaagtgcaatgctccgaattgggatg
accaatcctccttatattcttgagcacttgaaggagatagctgatgtcttgtgtcatcct
tgcgtatattcttttcttcatgtgccagttcagtcgggtagtgattcgatcttgagtgca
atgaaccgtgaatacactgtaggtgagttcaggaaggtggtggatacattaatggaactg
gtccccgggatgcagattgcaacggatgtaatttgtggatttcctggtgaaactgatgaa
gattttgctctgacagttgaccttattaaggactacaagcttgctcaagttcatatatca
cagttctatcctaggcccggcactcctgcggcaaggatgaagaaggttcctagtaacgtg
gtgaagcaacgaagtcgtgaattaactgctgtatttgagtcctttaccccatatactgga
atggaaggcaagatagagagaatatggattaccgacatagcttcagatggagttcatttg
gtgggacacactaagggatacatccaggtgctggtgattggtccagaaagcatgctgggt
acctcagttatggtgaaaatagcatctgtaggtagatggtcagttttcggagaagtgatt
gagatcctctgcccaaatagtaaggatgtccgctcacacgagtgttttgatgaaaggtgc
tccccctgtgccctttcagaagaagcttgtgcccgttcaaaagaacaagaacctttcact
gcaacatcaggttggtgcagtcagtgcccaacaggggaatcaacaaccttgctgaagaat
gatcttcagcaagataaccataggagcagaaacctaaccggatggtttctgaggaatcgt
aagaatcagtcttccaaaaagatggacttaactagcctggaatctgaggagaggcagata
caggatttaggtcgcccaagcgcttggagtcctgttgatatggctcttcttagtggaata
ttattgagcttgttcgcaattgtaattctatttctgaatcttggatctaggagtttatca
tctaagtaa
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