Capsicum annuum (peppers): 107867875
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Entry
107867875 CDS
T04646
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107867875
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107867875
Factors involved in mRNA localization
Other mRNA localization factors
107867875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
107867875
NCBI-ProteinID:
XP_016569828
LinkDB
All DBs
Position
4:90917160..90986289
Genome browser
AA seq
1287 aa
AA seq
DB search
MGVPIEEAIAALSTFSLEDDQPEVQGPGFWVSAEGGATISPIEYSDVAAYRLSLSEDTKA
IHQLNILIQEGKEMGSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLIQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELNFALLFLERHTLLRVLPVLVVLAASSVKDSESLYKRVKINRLINIFKNDPVV
PAFPDLHLSPAAILKELSTYFPKFSAQTRLLTLPAPHELPLREAQDYQRQYLIVNHIGAI
RAEHDDFTIRFASAMSQLVLLKSIDGVDVEWVKEIKGNIYDMVVEGFQLLSRWTARVWEQ
CAWKFSRPCKDPVPVESHDMPASFSDYEKVVRYNYSAEERKALVELVSYIKSIGSMMQKV
DTSVTDALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPE
TEMQSYQHSGEESRGTFFYPRPVAPTSAQVHCLQFLIYEVVSGGNMRKPGGIFGNSGSEI
PINDLKQLETFFYKLGFFLHVLDYTATLGTLTDLGFLWFREFYLESSRVIQFPVECSLPW
MLVDHVIESPVIGLLESALMSFDIYNDAAQQALVILKQRFLYDEIEAEVDNCFDIFVLKL
CETIFTYYKSWAASELLDPSFLFAIDIGEKFAVQPMRFVALLKTTRVKLLGRTINLRSLI
ADRLNKMFRDNLEFLFDRFESQDLCAIVELEMLLDILQLTHELLLKDLTIDSFNLMLNEM
QENVSLVSYSSRLASQIWTEMQNDFLPNFILCNTTQRFVRSSRVPPVPVQKPSIPYAKAN
FYCGTPDLNSAYQSFARLYCGFFGVSHMFSLVKLLGSRSLPWLIRALLDNISNKITTVEP
MITGLQEALPKSVGLLPFDGGISGCMRLAKEHLSCWHSKSELKAEVLCGIKEIGSVLYWM
GLLDIVLREVDTRHFMQTAPWLGLIPGADGQILHSQEEGDSPMVTLFKSATTATMSDPNC
TSPTSFHTISRQAEAADLLYKANINTGSVLEYALAFTSAALDKYCSKWSTAPKTGFIDIT
TSKDFYRIFSGLQIEYLEESVQLQSNTYEMLGDSVAWGGCTIIYLLGQQLHFELFDFSHQ
VLNVAEVESVAISPTQKNPNFLQGIEGLLEAMKKARRLNNHVFSMLKARCPLEDKQACAI
KQSGAPLHRAKFENTVSAFETLPQKGA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttccaattgaagaagccatagcggcactatccacattttctttagaggatgat
caaccagaagtacaagggccggggttttgggtttcagctgaaggaggtgcaactattagt
ccaatcgagtatagtgacgtggctgcatataggctgtctttatcggaagacactaaagct
attcaccagttgaacatacttatacaagaggggaaggaaatgggttccgtgctctacaca
tatagaagttgcgttaaagcgcttccccagcttccagattctatgaagcaaagccaggct
gacctgtatcttgaaacttatcaagttttggatttggaaatgagccgtctgcgtgaaatt
cagagatggcaagcatccgctgcatctaagctggcagctgacatgcaacgtttttccaga
cctgagcgtcgtattaatggtcccacagtaactcatctttggtccatgctgaaattactt
gatgtcctgatccagcttgatcatcttaaaaatgcaaaagctagtatacctaatgacttc
tcttggtacaaaaggacattcacacaagttagtgtgcaatggcaagatacagattcaatg
agggaggagttagatgatctgcagatcttcttgagcacgaggtgggctattctgttaaac
ttgcatgttgagatgttccgggtgaacaatgttgaagacattcttcaagttctcatcgtc
tttatagtcgagtcgttggagttgaattttgcgcttctatttctggagaggcacacactt
cttcgtgttttgcctgtccttgttgtcctagcagcatcatcagtgaaagatagtgaatca
ttgtacaaaagggtgaaaatcaatagacttatcaacatatttaagaatgatcctgtggta
cctgctttcccagatcttcacctgtctcctgctgcaattttaaaagagttatcaacatac
ttccctaaattttctgcacaaactaggcttctcactcttccagcacctcatgagctgcca
ctgcgtgaggcacaagattatcagcgacaatatctgattgtcaaccatattggggcgatc
cgtgctgagcatgacgacttcactattcgttttgcttcagccatgagtcagcttgtcttg
ctaaaatcaattgatggcgtggatgttgagtgggttaaggaaatcaaaggaaatatttat
gacatggttgttgaaggttttcaactcttaagcagatggactgcacgagtttgggaacaa
tgtgcttggaaattttctcgcccatgcaaggatcctgttccagtagagtcacatgacatg
cctgcatcattttccgactatgaaaaggtagtacggtacaattatagtgctgaagaaagg
aaggctctggttgaacttgtgagctacatcaagagtattgggtcaatgatgcagaaggtt
gacacttcagtgaccgacgccttgtgggagacaatccatgcagaggtgcaagattttgta
caaaatacgctggcgacaatgttgcggactacctttcggaagaagaaagacctttctagg
attctttctgatatgagaacactttcagcagattggatggcaaatactagtaagccagag
actgaaatgcagtcatatcagcatagtggtgaagaaagcagagggaccttcttttatcca
aggccagtagcaccaacgtctgctcaggtccattgcttgcagttcctcatatatgaggtg
gtttctggtggtaacatgcggaagcctggtggtatttttggaaatagtggttctgaaata
cctatcaatgacttgaaacagctggagacgtttttctacaagcttggttttttcttacat
gtattagactacacagctaccctaggaactttgacagatcttggttttttatggtttaga
gaattctatctggagtcttctcgtgttatacagttccccgttgaatgctcccttccatgg
atgctggtggatcatgtgatcgaatctccagttattggtctactggagagtgccttgatg
tcatttgacatctataatgatgctgctcagcaagcattagtgatcctcaagcaacgtttt
ctatacgatgaaatcgaagctgaggtggacaattgttttgatatatttgtcttgaagttg
tgtgagactatttttacatactacaaaagttgggcagccagtgagctacttgatccatca
tttctctttgccatagacatcggcgaaaaattcgctgtccagccaatgagattcgtagct
cttttgaaaacgactagagtgaagcttctaggtaggaccatcaacttgagaagtttgatt
gctgataggttgaacaaaatgttcagagataatcttgaattcttgtttgatcgctttgaa
tcacaggatttatgtgctattgtggaactggagatgttgctggacatcttgcagcttact
catgaattactcttgaaagaccttacaatagattctttcaatcttatgttgaatgagatg
caggagaatgtatcccttgtttcttactctagtcgactggcttctcagatttggacagaa
atgcaaaatgacttcttgccaaatttcatcctctgcaatactactcagcgttttgtccga
tcatcacgagtgcccccggttcctgtccagaagccttcgattccttatgcaaaggcaaac
ttctactgtggtactcctgatctgaattctgcttaccagagctttgctcgattgtactgc
gggttttttggtgtgtctcacatgttttctctagtcaagcttttgggatctaggtcactt
ccttggcttatccgagcccttttggataatatatcgaacaagattactaccgttgaacca
atgattactggactgcaagaagctttgccgaagtctgtagggttacttccatttgatggt
ggtatatcaggctgcatgaggcttgccaaggagcatcttagctgctggcattcaaagtct
gaactcaaagctgaagtcctttgtggaatcaaggagattggtagtgtattgtattggatg
ggacttcttgatattgtattgagagaagttgatacccgccattttatgcaaactgctcct
tggttgggcttgattcctggtgctgacgggcaaatattgcactctcaagaagagggagat
agccctatggtcactttgtttaaatctgcaactactgcaaccatgtccgaccctaactgc
acaagtccaacatcatttcacactatatcaagacaagcagaagctgctgatttgttgtac
aaagccaatattaacactggaagtgtgttggaatatgcccttgcttttacaagtgctgca
ttagataaatactgcagtaaatggagtacagccccaaagacgggttttattgatattact
acttcaaaggacttctaccgaattttcagtggactccaaattgaatacctggaggaatct
gttcagctacaatccaacacatatgaaatgctgggtgattcagttgcctggggtggatgt
acaataatctacctgcttggccaacaattgcattttgaattgtttgatttttcccatcaa
gtcctcaatgttgctgaggtggagtctgtagcaatatccccaacccagaagaatcctaat
ttcctccaggggattgaaggtttgctggaagctatgaaaaaagcacggagactaaacaat
cacgtgttttcaatgttgaaagcgcgctgcccattggaagataaacaggcttgtgccatc
aagcaaagtggtgcaccattgcatcgggcaaaatttgagaatactgtgtccgcttttgaa
acattgccacagaaaggtgcctga
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