Capsicum annuum (peppers): 107867891
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Entry
107867891 CDS
T04646
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107867891
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
107867891
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
PDS5
PHD
Motif
Other DBs
NCBI-GeneID:
107867891
NCBI-ProteinID:
XP_016569847
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All DBs
Position
4:86596219..86623702
Genome browser
AA seq
1790 aa
AA seq
DB search
MAANSSGGGSGVPQGISLSNTVHGEIAPSLPLPSLPVFCGALDQDLRLFDERSEECRSLN
RSDVLSHASKIADLLQNTDVSYLSLRADASPQPCGFVGHLDLHNEVLRCNSEAFDLTNAA
HCSSFSGPIKETAQSRNVDSNPLGSVPAVQLAQQGTAEIQNYQHDHVISDVTASSRKPKV
KKKGRENTLRSTGSDASECQDAVAAAFCEMLEDFCGRAEIFSDERDDREFLPMSAADIKV
VLKEITSIRAKKALQLVPVDNLVKLLRVLDYQIHRAEGLSINDCEHMDTEVVSSIFCALE
SIHAALAVMAYNGMPKQLYKEEIIERITEFSRHQVMDVIFGSDPVYRALHKPTEIGIPEG
EEDEEFDGKFVSPNRKKRSTRSVKPRKSTSNKVSSAVSNILQKLDVILGFLKELCTIERL
PDSCILQLIRTCFTTFVVDNIQLLQMKSISLISGIFYVYTQHRASIMDEALQILLKLPSS
KRMPRTYPLPDEEQRQIQLITALLIQLVQSSSNLPDVLRESSDSPSLEIAIDASYPTKSF
ESVTEACCLFWSRVLQRLTNTKNQEAAELKTMIENLVIDLLTTLNLPEYPASAPLLEVLC
VLLLQNAGLKSKDISVRSMAIDLLGTIAARLKQDAVRCREEKFWIVKELRSEDMIDQNLP
KDACSVCLDFRIDKSLDRCHDCQRMFHVNCTGIRGHDMSNRVFQCQMCFSKKQLLVLKTL
SESQTKDAGQNNRTKSGKTSQVTEAITNLEIVQQLLLNYLHDAATVDDLHLFTRWFYLCL
WYKDDPNSEQKFMYTVARLKSQAIVRDSGSLSSLMTRESAKKITLALGQNSSFSRGFDKI
LQVLLASLRENSPIIRAKALRAVSSIVEADPEVLGDKLVQTAVEGRFCDSAISAREAALE
LVGRHIASYPDVGLKYFEKLAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTAACVEII
SRVNDEESSVQDLVCKTFYEFWFEEPSGLQHQYFEDGSSVPLEVAKKTEQIIQMLRRMPS
LQPLVTVIKRNLALDFFSQSAKAVGINLASLASVRRRCELMCKCLLEKILQVTEMNTGDG
EVHMLPYMRLLHAFCVVDPTLCAPASDPSQFVITLQPYLKSQADNRVAAQLLESMIFVID
SVLPLLRKLPQSVADELEQDLKQMIVRHSFLTVVHACIKCLCSVSKVAGKGSAIIEHLIQ
LFFKRLDALGFSNKQNFQQVGRSLFCLGLLIRYSSCLLYASVSSNNLHVASSLNLFKKYL
QAEDFVIKVRSLQALGYVFIARPQCMLEKDVGRILEATLSSNTDTRLKMQSLQNMYEYLL
DAESQMGTDNASENEVANTAVGGHSVPVAAGAGDTNICGGIIQLYWAKILERCLDVNEQV
RQSALKIVEVVLRQGLVHPITCVPSLIALETDPQEMNSKLAHHLLMNMNEKYPSFFESRL
GDGLQMSFMFIHAMNKGGSQSLNPQSKAPGIMSGKSEPGSFTHARLGVSRIYKLIRGNRI
SRNKFIASVVRKFDTPSWSDSVVPFLIYCTEILASLPFISPDEPLYLIYSINRIIQVRAG
TVEANMKGFLQFFQAGCQKINASESIQTEPNQAIRRETETMVANKKIEEGLEGDHVGIDY
GSVDSYMPHQASLNTHSISNADLQIIQVECLAAGALQLLLRLKRHLKIVYDLNDARCQVY
SPNESLKPGEGLSRQSLPFNVNEINIEHPKNYEDFFRRYQDFKNALKEDAVDYAIYTANI
KRKRPPPRRSRKSGRMMGGDDEDDEDDEDWGSGMRTSNSARRSSSRLRQQ
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaattcaagtggcggcggcagtggtgttcctcaaggcataagtttatcgaat
accgtgcacggtgaaattgcgccgtctttgccattgccttcacttcctgtgttctgcggc
gcactcgatcaggaccttcggttgttcgacgagcggagtgaagaatgtagatcgttgaat
cggagtgatgtacttagccacgctagtaaaattgctgacctgcttcagaatactgacgtt
tcttatttgagccttagagctgatgcaagtcctcaaccttgtggctttgtggggcacctt
gatctgcataacgaagtgcttagatgtaactctgaagcctttgatctaacaaatgcagca
cattgttcaagtttctcaggccccattaaggagactgcacagagtcgcaatgttgattca
aatccccttgggagtgtacctgctgtccaacttgcacaacaaggcactgcagagatccaa
aattatcagcatgaccatgttattagtgatgttactgcatcttctagaaaaccaaaggtc
aagaagaaaggaagggagaacaccttacgatcaactggttctgatgcttctgaatgtcaa
gatgcagttgcagcagctttttgtgagatgttggaagatttttgtggaagggcagaaatt
tttagtgatgaacgggatgatagagaatttttaccaatgtctgcggcagatattaaggtt
gtcttgaaggagatcacatctatccgagcaaagaaagcactgcaattggttccagttgat
aatctagtgaaattactcagggttttagattaccagattcatcgagcagaaggtttatca
attaatgattgtgaacatatggatacagaggttgtgtcatcgattttctgtgctttagag
tccattcatgcagctttagcggtaatggcttataatgggatgcctaagcaattatataaa
gaagaaattattgaaagaatcacagagttctctcggcaccaagttatggatgttatcttt
ggtagtgatcccgtataccgtgcgctgcacaaaccaaccgagatagggattcctgaaggt
gaagaagatgaagagtttgatgggaaatttgtttcaccaaacagaaagaagagatctact
aggagtgtgaagccaaggaaatcaacatcaaacaaggtttcttctgctgttagtaatata
cttcagaagcttgatgtgattcttggttttcttaaggagttgtgcactatagagcgccta
ccagacagttgcattctccaacttattaggacctgtttcacaacatttgtggttgataat
atccagcttttgcaaatgaaatcaataagcttaattagtgggatattttatgtgtacaca
cagcatcgtgcttccataatggatgaggcacttcagattcttttgaagttaccttcttct
aagcgcatgcccagaacttatcctctacctgatgaagagcagaggcaaattcagctcatc
actgctcttttgattcaactagttcagagcagttcaaaccttccggatgttttgagggag
tcatctgacagtccttcactagaaatagcaattgatgccagttaccctaccaaatccttt
gagtcggtcacagaagcttgctgtcttttctggagtcgtgttcttcaacgtctaacaaac
acaaagaatcaagaggcggctgagttgaagacaatgattgagaatcttgtcattgatttg
ttaactactttaaatttgcctgaatatcctgcctctgctcctcttctggaggttctttgt
gttttactccttcaaaatgctgggttgaaatctaaagatatttctgttcgttcaatggcc
attgaccttcttggcacaattgctgcaaggctgaaacaagatgcagtccgctgtagggag
gagaaattctggatagtaaaggagttgagaagcgaggacatgattgaccagaatcttccc
aaggatgcatgttctgtttgtttggatttcaggattgacaaatcacttgatcgatgccat
gattgtcagagaatgtttcacgttaactgtactggaatcaggggtcatgatatgtctaat
cgtgtctttcaatgtcagatgtgtttctccaagaagcaacttcttgtactgaaaacacta
tctgagtctcagaccaaggatgctgggcaaaataaccgtactaagtcaggaaagacgtca
caagttactgaggcaatcacaaatttggagattgttcagcagctactactgaattatctc
catgatgctgcaactgttgacgatttacatttatttactcgctggttctatctatgtctt
tggtataaagatgaccctaattcagagcagaagttcatgtatactgttgcacgattaaag
tcacaagcaattgtgcgcgactctggttcactttcgtcactaatgacaagagagtcggca
aaaaagataactctagcgttgggacagaatagttctttctctagaggatttgacaagatt
ctgcaagtgcttctggcaagtttgagggagaactctccaatcattcgtgcaaaggcattg
cgagcagttagtagcattgttgaggctgatccagaggttttgggtgataagcttgtccaa
acagcagtggaagggaggttttgtgactctgctatatctgcccgagaagctgcgttggaa
cttgtaggcaggcatattgcttcatatcctgatgttggtctaaagtactttgagaagttg
gcagaaagaataaaggatactggagtaagcgtgcgaaagcgtgctatcaaaatcatacgg
gacatgtgcacttcaaatgctaacttctcagagtttactgctgcttgcgttgaaattatt
tcccgagtaaatgatgaggaatccagtgtacaggacctggtctgcaagacattttatgag
ttttggtttgaagaaccttctggtttacaacatcagtattttgaagatggaagttctgtt
ccacttgaggtcgctaagaaaacagagcaaattattcagatgctgagaaggatgcccagt
ctccaacctcttgtaactgtgattaaacgcaacttagcccttgatttcttttcacaatct
gctaaagcagttggcatcaaccttgcatcccttgcttcagtccgtaggcggtgcgagttg
atgtgcaagtgcttactggagaaaatactgcaggtgacagagatgaatacaggagacgga
gaggtgcacatgctaccatacatgaggctcttgcatgctttttgtgttgttgatcctact
ctatgtgcaccagcttctgatccttcccagtttgtgatcacactacaaccttatttgaag
agtcaggctgataatcgagttgcagctcagcttttggagagtatgatctttgtaattgat
tctgttttgcctttactacggaagcttcctcaaagtgttgccgatgaacttgaacaagat
ctgaagcaaatgattgttcggcactctttcttgacagttgtccatgcttgcatcaagtgc
ctctgctctgtaagtaaagttgctggaaaaggttcagctattattgaacaccttatccag
ttattcttcaaacgcctagatgccctaggtttcagtaacaagcagaactttcagcaagtg
ggccgctctcttttctgcttgggtttgctaatacgttacagtagctgtttgttgtatgca
tctgtttccagtaacaacttacatgttgctagcagcctcaacctatttaagaaatatctt
caggccgaggactttgttatcaaggtccgctcattgcaggcactgggttatgtttttatt
gctcgcccccaatgtatgctggaaaaggatgtaggaagaattttggaggccacactttct
tctaatactgatacacgactcaagatgcaatcactgcaaaacatgtatgagtatcttctt
gatgctgaaagtcagatgggaacagataatgcaagtgagaatgaagttgctaatacagca
gttggtggccatagtgtgcctgttgctgcaggggctggtgataccaacatctgtggggga
ataattcagttgtattgggctaaaatcttagaaagatgtctggatgtgaatgaacaagtg
cgtcagtctgctcttaagattgtggaagttgtattgcgtcaaggtcttgttcatcctatt
acctgtgttccctcattgatagctcttgaaacagatcctcaggagatgaactcaaagctg
gctcatcatttgttgatgaacatgaatgagaagtatccatctttctttgagagccgtctt
ggtgatggtctacaaatgtcttttatgttcatacatgccatgaataaaggtggttctcaa
agtttaaatccccagtctaaagctccaggtatcatgtcaggaaagtcagagcccggctca
tttacccatgcaaggcttggggtgtctcgaatctacaagctcatccgtggaaatcgtatt
tcaaggaacaaatttatagcctcagttgtgcgcaaatttgatacaccaagctggagtgat
tcagtagtcccatttttgatatactgcactgaaattcttgcttcgcttccattcatatca
cctgatgagcccctttatttgatctattctataaatcggattattcaagttagggctggc
acggtggaggcaaatatgaagggatttttacaattttttcaagcaggttgtcaaaaaatt
aatgcaagtgagagcattcaaacagagcctaatcaagctattaggcgtgagactgaaaca
atggttgccaacaaaaaaattgaggaaggcttggaaggtgatcatgttggtatagattat
ggatcagtggattcatatatgccccatcaggcatcattaaatacacatagcatatcaaat
gctgatttgcagataatccaggtggaatgtctggcagctggtgctttacagctgcttctg
cgactaaagaggcacctcaagattgtgtatgatctaaatgatgcccgttgccaggtatat
tctccaaatgaatccctaaaaccgggggaaggtctttcaaggcaaagtcttcctttcaat
gtgaacgaaattaacattgagcacccaaagaattatgaagattttttccgtagatatcag
gatttcaagaatgccttgaaggaagatgcagtggactatgcaatctacacggcgaacatt
aaaaggaaacgccctcctccaagaagaagcaggaaatctggtcgaatgatgggtggtgat
gatgaagatgatgaagacgatgaagattggggtagtggaatgaggactagtaatagtgcc
agaagaagcagtagcaggttaaggcagcagtaa
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integrated database retrieval system
