Capsicum annuum (peppers): 107867894
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Entry
107867894 CDS
T04646
Name
(RefSeq) probable pectate lyase P56
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107867894
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107867894
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107867894
NCBI-ProteinID:
XP_016569850
UniProt:
A0A1U8GFE8
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Position
4:42550614..42552366
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AA seq
397 aa
AA seq
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MESYRTKINVLIVLILFVLAAVGTATNSPRRKLGNKRYKGPCMAVNSIDKCWRCDPNWEK
DRQKMAHCALGFGIIAMGGKSGPYYIVTDNSDDDVIDPKPGTLRYGVIQKGPLWIIFAKS
MRIKLRRELIVSSHKTIDGRGRYVHITNGAGIKIQCASNVIISNLRIKNIVPTPGGLLRE
SDDHLGLRSGDEGDAISIFNSHDIWIDHISMSHAADGLIDAVAGSTNITISNCHFTDHEK
VMLFGANDHYEADKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
RATIISQGNRFIANDKLLMKEVTYREKSTASVEEWMKWTWISQGDDLENGATFTPSGDQN
LLEKIDHLNLIQPEPSSKVGILTRFSGALACKVGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctacagaacaaaaatcaatgtactcattgtcctcattctctttgtattagct
gcagtagggacagcaaccaactctccaagaaggaaactcggaaataagagatacaaaggc
ccgtgtatggccgtgaattctattgacaagtgctggagatgcgaccctaactgggagaaa
gatcgccagaaaatggcccattgtgcattgggcttcggcatcattgccatgggaggaaag
tcgggcccatactacattgtcaccgataattctgacgatgatgttatcgatcctaagccc
ggaactctgcgatatggtgtgatccaaaagggtcccttgtggatcatatttgccaaaagc
atgagaattaaattgagaagggaacttatcgtgagtagccataaaacaatcgatggccgt
ggaagatacgttcacataacaaatggagctggcattaagatacaatgtgcatccaatgtc
atcatctctaacctccgtattaaaaatattgtacctaccccaggtggcctgcttagggaa
tccgatgaccaccttggcctaaggagcggagatgaaggtgatgccatcagtatcttcaac
tctcatgacatatggattgaccatatctctatgtcccatgctgccgatggtcttatcgac
gctgttgctggttctactaatattaccatatccaattgccacttcactgaccatgaaaaa
gtaatgttgttcggtgctaacgatcattacgaagctgacaaggacatgaagattacatta
gcgtacaaccatttcggaaagaggttggatcaaaggatgcctaggtgcaggtttggattt
ttccatctggtgaacaatgactacactcactgggaaaggtacgctattggaggaagcagt
agagccaccatcatcagccagggcaataggtttattgctaatgataaattgttgatgaaa
gaggtgacatatagagaaaaaagtacagcgagtgtggaagaatggatgaaatggacttgg
atatcacaaggagatgatttggaaaatggtgctacatttacaccatctggtgaccagaat
ttactcgaaaaaattgaccatctaaatttgattcaaccagaaccatcttctaaagttgga
atactaactaggttttcaggtgctctggcttgcaaagttggacgcccatgctaa
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