Capsicum annuum (peppers): 107868025
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Entry
107868025 CDS
T04646
Name
(RefSeq) long chain base biosynthesis protein 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00600
Sphingolipid metabolism
cann01100
Metabolic pathways
cann04382
Cornified envelope formation
Module
cann_M00094
Ceramide biosynthesis
cann_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107868025
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107868025
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cann01007
]
107868025
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
107868025
Amino acid related enzymes [BR:
cann01007
]
Aminotransferase (transaminase)
Class II
107868025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
107868025
NCBI-ProteinID:
XP_016570058
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Position
4:complement(119957891..119973344)
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AA seq
491 aa
AA seq
DB search
MGGTTIVLRFIFFTSMLRDASDWVTWISEAPFARAVVFGVNIGGHLFVEGLLLVVILFLL
SQKSYKPPKRPLTKKEIDELCDEWVPEPLIPTITDEMKSEPPVLESAAGPHTTVNGKVVV
NFTSANYLGLLGNEKLLETCTRALEKYGVGSCGPRGFYGTIDVHLDCESRIANFLGTPDS
ILYSYGLSTMFSAIPAFCKKGDVIVADEGVHWGIQNGLQLSRSTIMYFKHNDMESLRNTL
EKVTQENKRAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSLGVLGSS
GKGLTEYYNVLVDKIDIITAAMGHALATEGGFCTGSTRVIEHQRLSSSGYVFSASLPPYL
ASAAIKAFDILKENPDLITKLRENINTLFKGLQYIQGMEIASDPLSPIVFLRLKKSTGSS
KSDLKLLEDIADRVLKEDSVFVVTSKRSTLDKCNLPVGLRLFVSAGHSESDLEKASESLK
RVAASLLTDQS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaccactattgtgcttagatttatattttttaccagtatgctgagagatgca
tctgattgggtgacatggatatctgaggctccgtttgcaagagctgtggtgtttggagtt
aacattggagggcatctatttgtggagggtcttctcctggtggtcatccttttcctgcta
tcgcagaaaagttataaaccacccaaaagaccattgacaaagaaggaaatagatgaactg
tgtgatgaatgggtaccagaacctcttatccccaccattacagatgagatgaaatcggag
cccccagtacttgaaagcgctgcaggtcctcatacaactgtcaatggcaaggtggtggta
aattttacttctgccaattacctcggattattaggaaatgaaaagttacttgagacatgt
accagggcattggagaaatatggtgtaggttcttgtggtcctcgtggattctatggaaca
attgatgttcaccttgattgtgagtctaggatagctaattttcttggaactcctgattct
atactctactcttatggactttctacgatgttcagtgcaattccagcattttgcaagaag
ggtgatgtcattgttgcggatgaaggcgtccattggggaatacaaaatggacttcagctc
tctagaagtacaatcatgtacttcaagcacaatgatatggagtccttgagaaatacattg
gagaaagtcactcaagaaaacaagcgagctaaaaaacttaggcgatatattgttgttgaa
gcagtgtatcagaattctggtcaaatagctccattggatgaaatcatcagactgaaggaa
aaatacagattccgggtattgttggatgaaagcaattccttgggtgtgcttggcagttct
ggtaaaggtttaacagaatattacaatgttctggtcgacaagatagatatcattactgct
gccatggggcatgcattggccacagaaggaggattttgcaccgggagtacaagagtcatc
gaacaccagcgtctcagtagctctggttatgtgttttctgcttctttgcctccttatctg
gcaagtgccgcaatcaaagcatttgatatcctgaaagaaaatcctgaccttatcacaaaa
ttgagggaaaacattaatacactgtttaaaggtctacaatatattcaagggatggaaata
gcgagtgatccactctctcccatagtttttctaagactaaagaaatccacaggttcttca
aagagtgacctaaaactgctagaagatatcgcagatcgtgtcttgaaggaagattctgtt
tttgttgtcacttcaaagagatcaacacttgataaatgtaatttgccagttgggcttcga
ttgtttgtctcagcagggcactcagaatctgatctggagaaagctagtgaatcattgaag
agagtcgctgcttcactattgacagatcagagctag
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