Capsicum annuum (peppers): 107868103
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Entry
107868103 CDS
T04646
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107868103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107868103
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107868103
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107868103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
CCD97-like_C
zf-C3HC4_2
Nop14
Paf1
BUD22
Motif
Other DBs
NCBI-GeneID:
107868103
NCBI-ProteinID:
XP_016570176
LinkDB
All DBs
Position
4:complement(54489657..54495711)
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AA seq
406 aa
AA seq
DB search
MARFSVGREEEDDNEDGDSEGPARGGGGGGPVPKRRRTFGGTFSCSSVRRQQEQEQQQER
EREREREMVVDEEIEEEEEEEEEEEEEEEEEEEEWESESEEEESEEGRLGGVGDAEGSRG
SGSIARGNGSIARGNGSMAVDEQDNDVEGLRGNGSISVTLSDPDVLDCPICLEHLSVPVF
QCENGHIACASCCIKIANKCPSCCWPIGYNRCRAIEKVLESVKVSCMNKSYGCKEVLSYS
KKTVHENTCIYVPCSCPFRGCDFVGAATKVYAHFSDKHASSAVHMLFNAVHPIFIEKHRR
YQILQMSTKDVLFIINHASDRVGSSVNIICVGPAMQKRRFMYEIVATDGESTFKLESVAE
SVPNWSENTPLKKYLLVPRDIVNCGARLKLDVFIKERECIGSGSTT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattttcagttggtagggaagaagaagatgataatgaagatggagattcagag
gggcccgcaagaggaggagggggaggaggacctgttcctaaaaggcggcgaacatttggc
ggaactttttcttgttcttccgttcgccgtcaacaggaacaggaacaacaacaagaacga
gaacgggaaagggaacgggaaatggttgttgatgaagaaattgaagaggaagaggaagaa
gaggaggaggaggaagaagaagaggaagaggaggaggaagaatgggaatcggaatcggag
gaggaggaatcggaagaggggagattgggaggggttggtgatgcggagggttcaagaggg
agcggttcaattgcaagagggaatgggtcaattgcaagagggaatgggtcaatggctgtg
gacgaacaagataatgatgtggagggtttaagaggaaatgggtcgatatcggtgacgtta
tcggatccagatgtgttggattgtcctatctgtcttgaacatctctctgttcctgtcttt
cagtgtgagaatgggcacatagcatgtgcctcttgctgcatcaagattgctaataagtgt
ccatcgtgttgctggccaattggatacaaccgctgccgagctattgagaaggttctagaa
tctgtgaaagtctcatgcatgaacaaaagttatggttgcaaagaggttctgagttatagt
aagaaaactgtccatgaaaatacatgcatctatgtgccttgttcttgtcctttccgtggc
tgtgactttgtgggtgctgcaacaaaggtatatgcacattttagcgacaagcatgcttct
tcggcagtccacatgttattcaacgctgtccatccaatttttatagaaaaacatcgacgt
taccaaattcttcaaatgagcacaaaagatgtactttttatcatcaatcatgctagtgac
cgcgttggaagttctgtcaacattatctgtgttggaccagctatgcagaagagaaggttc
atgtacgagattgtagcaacagatggggagagcacttttaaactagaatctgttgcagag
agcgtcccaaactggtctgaaaatactcctttgaaaaaataccttctggtcccaagagat
atcgttaattgtggtgctcggctgaagttggatgttttcataaaagagcgggaatgcatt
ggtagtggcagcactacttag
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